RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 BPIP17213 487 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 TCN1P20061 433 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 CYP2A7P20853 494 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 CD1CP29017 333 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 AKT1P31749 480 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 ETV3P41162 512 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 CDKN1CP49918 316 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 AGTR2P50052 363 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 HNMTP50135 292 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 FOXA1P55317 472 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 AP1S2P56377 157 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 MS4A2Q01362 244 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 TRAF3Q13114 568 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 GRB7Q14451 532 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 AGERQ15109 404 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 IMPG1Q17R60 797 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 C6orf136Q5SQH8 315 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 PLEKHS1Q5SXH7 462 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 NKAIN2Q5VXU1 208 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 TSPAN33Q86UF1 283 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 CDYL2Q8N8U2 506 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 TMEM102Q8N9M5 508 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 PATE1Q8WXA2 126 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 STARD8Q92502 1023 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 PPWD1Q96BP3 646 aaKnown RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 RNF31Q96EP0 1072 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 SMIM14Q96QK8 99 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 KCNA7Q96RP8 456 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 SLC30A3Q99726 388 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 PKP2Q99959 881 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 KCTD14Q9BQ13 255 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 NTMT1Q9BV86 223 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 DDA1Q9BW61 102 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 DPEP2Q9H4A9 486 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 ALG2Q9H553 416 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 ZNF768Q9H5H4 540 aaKnown RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 WDR26Q9H7D7 661 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 ZNF696Q9H7X3 374 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 NOL11Q9H8H0 719 aaKnown RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 GPN2Q9H9Y4 310 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 IL26Q9NPH9 171 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 CCM2LQ9NUG4 571 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 SLC39A1Q9NY26 324 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 PTBP2Q9UKA9 531 aaKnown RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 PACSIN3Q9UKS6 424 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 MAPRE3Q9UPY8 281 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 ADGRG4Q8IZF6 3080 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 A0A0U1RQS6 177 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 LRRC14BA6NHZ5 514 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 GAPDHSO14556 408 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-216ENST00000554975 ARPC2O15144 300 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 NUAK1O60285 661 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 FTH1P02794 183 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 CAPN1P07384 714 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 HIST1H2AGP0C0S8 130 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-216ENST00000554975 BMP2P12643 396 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 HIST1H2ADP20671 130 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 LHCGRP22888 699 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 KELP23276 732 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 SLC6A2P23975 617 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 FASP25445 335 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 VARSP26640 1264 aaKnown RBP10.67□□□□□ -0.7
SHMT2-216ENST00000554975 HTR1EP28566 365 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 ALDH4A1P30038 563 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 GRIA3P42263 894 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 PNLIPRP1P54315 467 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 CHRNA6Q15825 494 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 FXNQ16595 210 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 VPS26BQ4G0F5 336 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 TBCELQ5QJ74 424 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 TMTC4Q5T4D3 741 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 GPRC6AQ5T6X5 926 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 LRRC66Q68CR7 880 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 RAET1GQ6H3X3 334 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 LETMD1Q6P1Q0 360 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 UGT2A3Q6UWM9 527 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 MSANTD1Q6ZTZ1 278 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 Q6ZVL8 140 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 ZNF438Q7Z4V0 828 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 HSD11B1LQ7Z5J1 315 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 MILR1Q7Z6M3 343 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 RETREG3Q86VR2 466 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 C17orf82Q86X59 251 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-216ENST00000554975 SLC15A3Q8IY34 581 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 TBC1D21Q8IYX1 336 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 BMPERQ8N8U9 685 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 TEX19Q8NA77 164 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 GALNT11Q8NCW6 608 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 OR4F6Q8NGB9 312 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 OR8J3Q8NGG0 315 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 HIST1H2AHQ96KK5 128 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 ZNF597Q96LX8 424 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 COQ10AQ96MF6 247 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 HIST1H2AJQ99878 128 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 CTRCQ99895 268 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 H2AFJQ9BTM1 129 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 CD244Q9BZW8 370 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 IPPKQ9H8X2 491 aa10.67□□□□□ -0.7
SHMT2-216ENST00000554975 PHPT1Q9NRX4 125 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms