RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 URADA6NGE7 173 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 ERI3O43414 337 aaKnown RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 GALR3O60755 368 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 SKAP2O75563 359 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 RSL1D1O76021 490 aaKnown RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 KIAA0754O94854 1291 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 NSA2O95478 260 aaKnown RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 HBQ1P09105 142 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 BSGP35613 385 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 TSFMP43897 325 aaKnown RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 SHC2P98077 582 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 HMGCS1Q01581 520 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 COL9A2Q14055 689 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-208ENST00000553719 HERC3Q15034 1050 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 NDUFA9Q16795 377 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 ZNF793Q6ZN11 406 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 TTLL10Q6ZVT0 673 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 ABHD13Q7L211 337 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 METTL4Q8N3J2 472 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 PROKR1Q8TCW9 393 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 C19orf60Q96EN9 201 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 MEAF6Q9HAF1 191 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 IRAK4Q9NWZ3 460 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 VPS29Q9UBQ0 182 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 SLC12A4Q9UP95 1085 aa17.12■□□□□ 0.33
PSEN1-208ENST00000553719 TRABD2BA6NFA1 517 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 SLCO1B7G3V0H7 640 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 SAP18O00422 153 aaKnown RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 LSM1O15116 133 aaKnown RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 HDAC3O15379 428 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 BRINP1O60477 761 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 SH3BGRLO75368 114 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 STK17BO94768 372 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 B3GALT4O96024 378 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 NTRK1P04629 796 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 LINC00032P0C843 101 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 PRR35P0CG20 571 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 IL1RNP18510 177 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 SLC5A2P31639 672 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 RAB8AP61006 207 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 TMEM164Q5U3C3 297 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 TRIM40Q6P9F5 258 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 WDR75Q8IWA0 830 aaKnown RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 DSELQ8IZU8 1212 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 SRFBP1Q8NEF9 429 aaKnown RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 CHTF18Q8WVB6 975 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 NXPE2Q96DL1 559 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 RNF31Q96EP0 1072 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 MAELQ96JY0 434 aaKnown RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 FCRL1Q96LA6 429 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 KCNC2Q96PR1 638 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 C17orf62Q9BQA9 187 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 TBCDQ9BTW9 1192 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 MRPL1Q9BYD6 325 aaKnown RBP17.11■□□□□ 0.33
PSEN1-208ENST00000553719 ULBP3Q9BZM4 244 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
PSEN1-208ENST00000553719 A0A0A6YYC8 382 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 H0YIG0 161 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 I3L1I5 382 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 SLC28A1O00337 649 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 RTCAO00442 366 aaKnown RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 SDHDO14521 159 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 KLHL18O94889 574 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 TGDSO95455 350 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 KITP10721 976 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 CD82P27701 267 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 PLA2G16P53816 162 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 MAP7Q14244 749 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 KIAA0040Q15053 153 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 DEFB134Q4QY38 66 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 CGB2Q6NT52 195 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 PRMT9Q6P2P2 845 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 GALNT18Q6P9A2 607 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 TIPARPQ7Z3E1 657 aaKnown RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 DDIASQ8IXT1 998 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 LRRC34Q8IZ02 419 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 AMER3Q8N944 861 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 OR9A4Q8NGU2 314 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 RGMAQ96B86 450 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 APIPQ96GX9 242 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 METTL2AQ96IZ6 378 aaKnown RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 SORBS1Q9BX66 1292 aaKnown RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 NUF2Q9BZD4 464 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 DDX31Q9H8H2 851 aaKnown RBP17.1■□□□□ 0.33
PSEN1-208ENST00000553719 SLC22A11Q9NSA0 550 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 FGFR1OP2Q9NVK5 253 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 NAALAD2Q9Y3Q0 740 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
PSEN1-208ENST00000553719 A0A0G2JN53 185 aa17.09■□□□□ 0.33
PSEN1-208ENST00000553719 MEN1O00255 615 aa17.09■□□□□ 0.33
PSEN1-208ENST00000553719 POLR3GO15318 223 aaPredicted RBP17.09■□□□□ 0.33
PSEN1-208ENST00000553719 RGS14O43566 566 aa17.09■□□□□ 0.33
PSEN1-208ENST00000553719 HIST1H1TP22492 207 aaPredicted RBP17.09■□□□□ 0.33
PSEN1-208ENST00000553719 ATP5A1P25705 553 aaKnown RBP17.09■□□□□ 0.33
PSEN1-208ENST00000553719 TPP2P29144 1249 aaPredicted RBP17.09■□□□□ 0.33
PSEN1-208ENST00000553719 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
PSEN1-208ENST00000553719 LSP1P33241 339 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms