RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PIPSLA2A3N6 862 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TRABD2BA6NFA1 517 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 LACTBL1A8MY62 500 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 AIPO00170 330 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CBX4O00257 560 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 IFRD1O00458 451 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 BTN3A3O00478 584 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ORC5O43913 435 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 PCDHGA12O60330 932 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CACNG3O60359 315 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 FAM20BO75063 409 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 IPO13O94829 963 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 PRAMEF1O95521 474 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 AP2A1O95782 977 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 GLUD1P00367 558 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 LALBAP00709 142 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ESR1P03372 595 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 FABP1P07148 127 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 NMBP08949 121 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 LTA4HP09960 611 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ARP10275 920 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HNRNPLP14866 589 aaKnown RBP eCLIP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 SPI1P17947 270 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 GPD1P21695 349 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HOXC13P31276 330 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TRHRP34981 398 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 RPS19P39019 145 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TSPAN7P41732 249 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ALDH9A1P49189 494 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CLCN4P51793 760 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 AIF1P55008 147 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 SESN2P58004 480 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ERVFC1P60507 584 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CRADDP78560 199 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HSF2Q03933 536 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 NFYCQ13952 458 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 DGCR6Q14129 220 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 FCN2Q15485 313 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 MPEG1Q2M385 716 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TIMM50Q3ZCQ8 353 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 FLYWCH1Q4VC44 716 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 KLHL12Q53G59 568 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 RAB6CQ53S08 254 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CARD16Q5EG05 197 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TCTE1Q5JU00 501 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 RTP2Q5QGT7 225 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 LCN1P1Q5VSP4 162 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 KIAA1614Q5VZ46 1190 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CD276Q5ZPR3 534 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HEATR6Q6AI08 1181 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ESRP1Q6NXG1 681 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 VHLLQ6RSH7 139 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 PLET1Q6UQ28 207 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ATRAIDQ6UW56 229 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ENPP6Q6UWR7 440 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HSDL2Q6YN16 418 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 RHOUQ7L0Q8 258 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 SHFQ7M4L6 423 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ZFAND4Q86XD8 727 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC22A9Q8IVM8 553 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CEP97Q8IW35 865 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 NIM1KQ8IY84 436 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ENTHD1Q8IYW4 607 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 C7orf61Q8IZ16 206 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ABI1Q8IZP0 508 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 OR8H3Q8N146 312 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 UBE2J2Q8N2K1 259 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 STPG2Q8N412 459 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 STX19Q8N4C7 294 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CLDN22Q8N7P3 220 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF565Q8N9K5 539 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF540Q8NDQ6 660 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF675Q8TD23 568 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CREB3L4Q8TEY5 395 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF431Q8TF32 576 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HEXDCQ8WVB3 486 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HTR3CQ8WXA8 447 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 PIGBQ92521 554 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ELMO1Q92556 727 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 GTF3AQ92664 365 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 UPRTQ96BW1 309 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 MRPL48Q96GC5 212 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 LCORQ96JN0 433 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 PPP1R2P1Q96PQ5 205 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 MNTQ99583 582 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 BARD1Q99728 777 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TMEM43Q9BTV4 400 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 DPH7Q9BTV6 452 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 SARGQ9BW04 601 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 HAPLN2Q9GZV7 340 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 MS4A7Q9GZW8 240 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TWSG1Q9GZX9 223 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 RAB6CQ9H0N0 254 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TTYH1Q9H313 450 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 TRIM45Q9H8W5 580 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ACTR8Q9H981 624 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 GBA2Q9HCG7 927 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 GP6Q9HCN6 339 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 GALNT9Q9HCQ5 603 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 BIN3Q9NQY0 253 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms