RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SLC16A8O95907 504 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 PAK4O96013 591 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FAM157CP0CG43 387 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 F3P13726 295 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 CD59P13987 128 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 LHCGRP22888 699 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 ALDH1B1P30837 517 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 DUTP33316 252 aaKnown RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 HUNKP57058 714 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 STX1BP61266 288 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FOLH1Q04609 750 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 OPCMLQ14982 345 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FAM72AQ5TYM5 149 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 LCN1P1Q5VSP4 162 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FAM72DQ6L9T8 149 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 MEX3BQ6ZN04 569 aaKnown RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 USP50Q70EL3 339 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FAM72BQ86X60 149 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 SNX32Q86XE0 403 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 SIAH3Q8IW03 269 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 RCOR2Q8IZ40 523 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 CLYBLQ8N0X4 340 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 GPC2Q8N158 579 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 KLHDC1Q8N7A1 406 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 CCDC63Q8NA47 563 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 KBTBD8Q8NFY9 601 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 OR4C3Q8NH37 302 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 PIK3R3Q92569 461 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 PGLYRP2Q96PD5 576 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 KLHL5Q96PQ7 755 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 CDCA3Q99618 268 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 ATG101Q9BSB4 218 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FAM49AQ9H0Q0 323 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 SRD5A3Q9H8P0 318 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 WWOXQ9NZC7 414 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 FBXL5Q9UKA1 691 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 RUVBL2Q9Y230 463 aaKnown RBP4.36□□□□□ -1.71
LIMA1-205ENST00000550592 TCF19Q9Y242 345 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 C2CD2Q9Y426 696 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 R4GN57 208 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 TTC21AQ8NDW8 1320 aa4.36□□□□□ -1.71
LIMA1-205ENST00000550592 TRAV18A0A075B6X5 111 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 MSGN1A6NI15 193 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-205ENST00000550592 NPIPA3F8WFD2 350 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CCL24O00175 119 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CTDSPLO15194 276 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 EPHB6O15197 1021 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 KRT33AO76009 404 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF432O94892 652 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 GH1P01241 217 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 UMODP07911 640 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CD48P09326 243 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 PRSS56P0CW18 603 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 ATP6V1B1P15313 513 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 SFTPDP35247 375 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CDKN1AP38936 164 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CETN2P41208 172 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 MAGEA11P43364 429 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 IER3P46695 156 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 NPBWR1P48145 328 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 KCNJ10P78508 379 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 ITPK1Q13572 414 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 EXT1Q16394 746 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 IQCCQ4KMZ1 466 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 FUT10Q6P4F1 479 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 PODNL1Q6PEZ8 512 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 SH2D5Q6ZV89 423 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CPEB2Q7Z5Q1 589 aaKnown RBP4.35□□□□□ -1.71
LIMA1-205ENST00000550592 ANKRD46Q86W74 232 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 NR2C2APQ86WQ0 139 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CCDC60Q8IWA6 550 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-205ENST00000550592 C10orf53Q8N6V4 93 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 OR7A2PQ8NGA2 310 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 OR2T11Q8NH01 316 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 CKAP2Q8WWK9 683 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 DYRK2Q92630 601 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 C10orf90Q96M02 699 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 THAP2Q9H0W7 228 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 UBQLN3Q9H347 655 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 PRO3102Q9H379 93 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 ATP13A3Q9H7F0 1226 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 C10orf88Q9H8K7 445 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 RAVER2Q9HCJ3 691 aaKnown RBP4.35□□□□□ -1.71
LIMA1-205ENST00000550592 SLC52A3Q9NQ40 469 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 OR6C2Q9NZP2 312 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 C19orf25Q9UFG5 118 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-205ENST00000550592 GPR132Q9UNW8 380 aa4.35□□□□□ -1.71
LIMA1-205ENST00000550592 SMG6Q86US8 1419 aaKnown RBP4.35□□□□□ -1.71
LIMA1-205ENST00000550592 NME6O75414 186 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 AP2A2O94973 939 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 VTNP04004 478 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 OR3A1P47881 315 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 KHKP50053 298 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 MYL7Q01449 175 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 C17orf67Q0P5P2 114 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 TEAD2Q15562 447 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 FAM46CQ5VWP2 391 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms