RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 MS4A8Q9BY19 250 aa16.54■□□□□ 0.24
CDK4-207ENST00000550419 REXO4Q9GZR2 422 aaKnown RBP16.54■□□□□ 0.24
CDK4-207ENST00000550419 AICDAQ9GZX7 198 aa16.54■□□□□ 0.24
CDK4-207ENST00000550419 SEMA4BQ9NPR2 832 aaPredicted RBP16.54■□□□□ 0.24
CDK4-207ENST00000550419 RNF11Q9Y3C5 154 aa16.54■□□□□ 0.24
CDK4-207ENST00000550419 KCNMB2Q9Y691 235 aa16.54■□□□□ 0.24
CDK4-207ENST00000550419 ZFYVE26Q68DK2 2539 aa16.54■□□□□ 0.24
CDK4-207ENST00000550419 FOXE1O00358 373 aaPredicted RBP16.53■□□□□ 0.24
CDK4-207ENST00000550419 RDH16O75452 317 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 SUPT7LO94864 414 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 BMP10O95393 424 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 MLYCDO95822 493 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 CPA3P15088 417 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 TSFMP43897 325 aaKnown RBP16.53■□□□□ 0.24
CDK4-207ENST00000550419 CCR10P46092 362 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 PHEXP78562 749 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 CLCQ05315 142 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 CEP85LQ5SZL2 805 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 TRIM40Q6P9F5 258 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 ABHD17CQ6PCB6 329 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 MRGPREQ86SM8 312 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 MYLK4Q86YV6 388 aaPredicted RBP16.53■□□□□ 0.24
CDK4-207ENST00000550419 ZC3H7AQ8IWR0 971 aaKnown RBP16.53■□□□□ 0.24
CDK4-207ENST00000550419 HUS1BQ8NHY5 278 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 WDR20Q8TBZ3 569 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 PPP4R1Q8TF05 950 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 CCT6BQ92526 530 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 FAR2Q96K12 515 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 ZNF382Q96SR6 550 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 CRB3Q9BUF7 120 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 NPLQ9BXD5 320 aaPredicted RBP16.53■□□□□ 0.24
CDK4-207ENST00000550419 ROGDIQ9GZN7 287 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 SSU72Q9NP77 194 aaKnown RBP16.53■□□□□ 0.24
CDK4-207ENST00000550419 OXSMQ9NWU1 459 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 MAN2B2Q9Y2E5 1009 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 ACTL7BQ9Y614 415 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 IGSF10Q6WRI0 2623 aa16.53■□□□□ 0.24
CDK4-207ENST00000550419 A0A1W2PQ72 361 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 C4orf51C9J302 202 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 H3BQF6 201 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 ERI3O43414 337 aaKnown RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 TYROBPO43914 113 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 PCNAP12004 261 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 PTX3P26022 381 aaPredicted RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 XCR1P46094 333 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 CDH13P55290 713 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 RAB8AP61006 207 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 MAT1AQ00266 395 aaKnown RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 LCP2Q13094 533 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 ZRSR2Q15696 482 aaKnown RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDK4-207ENST00000550419 SYT16Q17RD7 645 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 DEFB109BQ30KR1 87 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 KHDRBS2Q5VWX1 349 aaKnown RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 FRG2Q64ET8 278 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 PPP1R32Q7Z5V6 425 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 MILR1Q7Z6M3 343 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 TMEM102Q8N9M5 508 aaPredicted RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 OR4F6Q8NGB9 312 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 EXTL1Q92935 676 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 VPS50Q96JG6 964 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 QRFPRQ96P65 431 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 KCNC2Q96PR1 638 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 FRG2BQ96QU4 278 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 TBCDQ9BTW9 1192 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 YIPF2Q9BWQ6 316 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 SOX17Q9H6I2 414 aaPredicted RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 DMRT3Q9NQL9 472 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 TRPS1Q9UHF7 1281 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 TUBD1Q9UJT1 453 aa16.52■□□□□ 0.24
CDK4-207ENST00000550419 RALYQ9UKM9 306 aaKnown RBP16.52■□□□□ 0.24
CDK4-207ENST00000550419 CACNA1GO43497 2377 aa16.52■□□□□ 0.23
CDK4-207ENST00000550419 FAM208BQ5VWN6 2430 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 IDSB3KWA1 339 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 PEX12O00623 359 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 ATXN7O15265 892 aaPredicted RBP16.51■□□□□ 0.23
CDK4-207ENST00000550419 SCELO95171 688 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 OTX2P32243 289 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
CDK4-207ENST00000550419 RRADP55042 308 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 PKNOX1P55347 436 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 CUL3Q13618 768 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 RBBP7Q16576 425 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 LINC00303Q3SY05 128 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 DEPDC1Q5TB30 811 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 RPS27LQ71UM5 84 aaKnown RBP16.51■□□□□ 0.23
CDK4-207ENST00000550419 LAPTM4BQ86VI4 370 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 CCDC63Q8NA47 563 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 TRPC4APQ8TEL6 797 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 CDK15Q96Q40 435 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 F2RL3Q96RI0 385 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 SERINC2Q96SA4 455 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 CENPKQ9BS16 269 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 ADNPQ9H2P0 1102 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 GSTO2Q9H4Y5 243 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 HCN3Q9P1Z3 774 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 C3orf18Q9UK00 162 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 ZNF225Q9UK10 706 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 HS3ST3B1Q9Y662 390 aa16.51■□□□□ 0.23
CDK4-207ENST00000550419 AGPSO00116 658 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms