RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 UGT3A1Q6NUS8 523 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 H3F3CQ6NXT2 135 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 GABPB2Q8TAK5 448 aaPredicted RBP11.46□□□□□ -0.57
DDX54-206ENST00000549271 MBD6Q96DN6 1003 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 THAP11Q96EK4 314 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 OLFM1Q99784 485 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 HES7Q9BYE0 225 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 DPH5Q9H2P9 285 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 KCNJ16Q9NPI9 418 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 PPANQ9NQ55 473 aaKnown RBP11.46□□□□□ -0.57
DDX54-206ENST00000549271 TMEM184CQ9NVA4 438 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 GRHL1Q9NZI5 618 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 WHRNQ9P202 907 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 TEKT2Q9UIF3 430 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 PDE10AQ9Y233 779 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 RNF6Q9Y252 685 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 VWA7Q9Y334 891 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 PSAT1Q9Y617 370 aa11.46□□□□□ -0.57
DDX54-206ENST00000549271 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 HEXAP06865 529 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 INHBBP09529 407 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 DNASE1P24855 282 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 MGAT5Q09328 741 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 TUBA3CQ13748 450 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 TRADDQ15628 312 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 PLAG1Q6DJT9 500 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 TUBA3EQ6PEY2 450 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 MBOAT1Q6ZNC8 495 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 CEP128Q6ZU80 1094 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 MAATS1Q7Z4T9 603 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 CPEB2Q7Z5Q1 589 aaKnown RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 BEST3Q8N1M1 668 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 WFDC11Q8NEX6 87 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 METTL21AQ8WXB1 218 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 CYTH2Q99418 400 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 MCMBPQ9BTE3 642 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 POLDIP3Q9BY77 421 aaKnown RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 FAM129AQ9BZQ8 928 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 VN1R1Q9GZP7 353 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 PARVBQ9HBI1 364 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 KLHL1Q9NR64 748 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 C19orf25Q9UFG5 118 aaPredicted RBP11.45□□□□□ -0.58
DDX54-206ENST00000549271 PLEKHA6Q9Y2H5 1048 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 HRH3Q9Y5N1 445 aa11.45□□□□□ -0.58
DDX54-206ENST00000549271 ZANQ9Y493 2812 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 H7BY64 318 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 CDK2AP1O14519 115 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 SLC16A5O15375 505 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 KLK8O60259 260 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 C8GP07360 202 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 CD96P40200 585 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 RGS4P49798 205 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 RPS15AP62244 130 aaKnown RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 SNRPNP63162 240 aaKnown RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 MAT1AQ00266 395 aaKnown RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 PHKG1Q16816 387 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 TMEM214Q6NUQ4 689 aaKnown RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 ADCK2Q7Z695 626 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 ZC3HC1Q86WB0 502 aaKnown RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 ZBED8Q8IZ13 594 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 GPATCH11Q8N954 259 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 BBOF1Q8ND07 529 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 OR9A4Q8NGU2 314 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 MCOLN3Q8TDD5 553 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 NUDT8Q8WV74 236 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 TM4SF19Q96DZ7 209 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 LINGO1Q96FE5 620 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 RMND5BQ96G75 393 aaPredicted RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 CCDC138Q96M89 665 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 PRAP1Q96NZ9 151 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 PCBD2Q9H0N5 130 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 SMYD2Q9NRG4 433 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 IKZF3Q9UKT9 509 aa11.44□□□□□ -0.58
DDX54-206ENST00000549271 CORO1CQ9ULV4 474 aaPredicted RBP11.44□□□□□ -0.58
DDX54-206ENST00000549271 TLN2Q9Y4G6 2542 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 NDC80O14777 642 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 PIAS1O75925 651 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 IL10P22301 178 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 ADSLP30566 484 aaPredicted RBP11.43□□□□□ -0.58
DDX54-206ENST00000549271 BCL6P41182 706 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 AGTR2P50052 363 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 IL2P60568 153 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 SP140Q13342 867 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 OR1C1Q15619 314 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 ACER2Q5QJU3 275 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 THEMIS2Q5TEJ8 643 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 TMEM211Q6ICI0 200 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 FAM45BPQ6NSW5 357 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 GALNTL5Q7Z4T8 443 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 CAMKMTQ7Z624 323 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms