RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 GPR45Q9Y5Y3 372 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 C4orf51C9J302 202 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 RTCAO00442 366 aaKnown RBP27.37■■□□□ 1.97
BRF1-213ENST00000548421 ZNF888P0CJ79 500 aaPredicted RBP27.37■■□□□ 1.97
BRF1-213ENST00000548421 G6PDP11413 515 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 SSR2P43308 183 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 INSM1Q01101 510 aaPredicted RBP27.37■■□□□ 1.97
BRF1-213ENST00000548421 ACY1Q03154 408 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 OR4C11Q6IEV9 310 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 DGLUCYQ7Z3D6 616 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 KIAA2013Q8IYS2 634 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 LIX1Q8N485 282 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 FITM2Q8N6M3 262 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 ZCCHC10Q8TBK6 192 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 ERP27Q96DN0 273 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 SORBS1Q9BX66 1292 aaKnown RBP27.37■■□□□ 1.97
BRF1-213ENST00000548421 ENAMQ9NRM1 1142 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 MCM8Q9UJA3 840 aa27.37■■□□□ 1.97
BRF1-213ENST00000548421 KLK1P06870 262 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 CDK4P11802 303 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 SDC1P18827 310 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 CCKBRP32239 447 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 MRPL19P49406 292 aaKnown RBP27.36■■□□□ 1.97
BRF1-213ENST00000548421 RAB8AP61006 207 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 CYP20A1Q6UW02 462 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 TRPM8Q7Z2W7 1104 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 CLNKQ7Z7G1 428 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 MIER2Q8N344 545 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 DDX31Q9H8H2 851 aaKnown RBP27.36■■□□□ 1.97
BRF1-213ENST00000548421 SDR39U1Q9NRG7 319 aaPredicted RBP27.36■■□□□ 1.97
BRF1-213ENST00000548421 FGF21Q9NSA1 209 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 ARMCX1Q9P291 453 aa27.36■■□□□ 1.97
BRF1-213ENST00000548421 SPTBP11277 2137 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 A0A0G2JN53 185 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 GNG14A0A1W2PPG7 69 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 FITM1A5D6W6 292 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 ANXA4P09525 319 aaPredicted RBP27.35■■□□□ 1.97
BRF1-213ENST00000548421 SMIM10L1P0DMW3 83 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 PCSK2P16519 638 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 CSRP1P21291 193 aaKnown RBP27.35■■□□□ 1.97
BRF1-213ENST00000548421 CSTF2P33240 577 aaKnown RBP eCLIP27.35■■□□□ 1.97
BRF1-213ENST00000548421 PDCD4Q53EL6 469 aaKnown RBP27.35■■□□□ 1.97
BRF1-213ENST00000548421 FAM9CQ8IZT9 166 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 ZNF501Q96CX3 271 aaPredicted RBP27.35■■□□□ 1.97
BRF1-213ENST00000548421 SMIM10Q96HG1 83 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 TEFMQ96QE5 360 aaKnown RBP27.35■■□□□ 1.97
BRF1-213ENST00000548421 ROGDIQ9GZN7 287 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 PRDM7Q9NQW5 492 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 SLC22A7Q9Y694 548 aa27.35■■□□□ 1.97
BRF1-213ENST00000548421 DMXL1Q9Y485 3027 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 ARHGAP10A1A4S6 786 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 H3BMH7 237 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 GFRA3O60609 400 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 EEDO75530 441 aaKnown RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 OR2B3O76000 313 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 GBAP04062 536 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 ALOX12P18054 663 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 TPP2P29144 1249 aaPredicted RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 ADSLP30566 484 aaPredicted RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 ITGA1P56199 1179 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 GRM7Q14831 915 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 CCNYL2Q5T2Q4 361 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 GARNL3Q5VVW2 1013 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 ZNF793Q6ZN11 406 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 ARHGEF39Q8N4T4 335 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 TTC29Q8NA56 475 aaPredicted RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 AGBL5Q8NDL9 886 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 OR1L3Q8NH93 324 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 CCDC106Q9BWC9 280 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 SPRTNQ9H040 489 aaPredicted RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 COPS7BQ9H9Q2 264 aaPredicted RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 SIDT1Q9NXL6 827 aaKnown RBP27.34■■□□□ 1.97
BRF1-213ENST00000548421 SERTAD3Q9UJW9 196 aa27.34■■□□□ 1.97
BRF1-213ENST00000548421 A0A088AWK7 358 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 SLC22A2O15244 555 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 ZNF10P21506 573 aaPredicted RBP27.33■■□□□ 1.97
BRF1-213ENST00000548421 HIST1H1TP22492 207 aaPredicted RBP27.33■■□□□ 1.97
BRF1-213ENST00000548421 EMP3P54852 163 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 PTGR1Q14914 329 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 C16orf72Q14CZ0 275 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 HERC3Q15034 1050 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 NDUFA9Q16795 377 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 CDCP2Q5VXM1 449 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 GPR135Q8IZ08 494 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 SCN3AQ9NY46 2000 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 MRPS2Q9Y399 296 aaKnown RBP27.33■■□□□ 1.97
BRF1-213ENST00000548421 CAPN7Q9Y6W3 813 aa27.33■■□□□ 1.97
BRF1-213ENST00000548421 HYKKA2RU49 373 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 SCELO95171 688 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 GPX3P22352 226 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 TACR1P25103 407 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 ATP5A1P25705 553 aaKnown RBP27.32■■□□□ 1.96
BRF1-213ENST00000548421 BTN3A2P78410 334 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 ZNF763Q0D2J5 394 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 FAM91A1Q658Y4 838 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 TLDC1Q6P9B6 456 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 ZCCHC7Q8N3Z6 543 aaKnown RBP27.32■■□□□ 1.96
BRF1-213ENST00000548421 OR8K5Q8NH50 307 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 TSSK3Q96PN8 268 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 OR6C1Q96RD1 312 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms