RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZNF583Q96ND8 569 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 TACO1Q9BSH4 297 aaKnown RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 SPNS1Q9H2V7 528 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 Q9H521 79 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 ERVMER34-1Q9H9K5 563 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 PRDM9Q9NQV7 894 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 TAS2R7Q9NYW3 318 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 ANAPC2Q9UJX6 822 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 CNOT11Q9UKZ1 510 aaKnown RBP12.84□□□□□ -0.35
PTCH1-215ENST00000547672 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 REV3LO60673 3130 aa12.84□□□□□ -0.35
PTCH1-215ENST00000547672 C5orf42Q9H799 3197 aa12.83□□□□□ -0.35
PTCH1-215ENST00000547672 TRBV23OR9-2A0A075B6M9 112 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 A0A1W2PRB8 838 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 GSAPA4D1B5 854 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 H0YJX3 145 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 H3BNX3 289 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 SCAMP1O15126 338 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 ZSCAN9O15535 394 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 LCMT2O60294 686 aaKnown RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 SH3BGRLO75368 114 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 EML2O95834 649 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 RETP07949 1114 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 ABCB1P08183 1280 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 GNSP15586 552 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 GPX2P18283 190 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 GGT1P19440 569 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 FASP25445 335 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 TPP2P29144 1249 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 AFF3P51826 1226 aaKnown RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 MTPNP58546 118 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 PHC1P78364 1004 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 PLIN5Q00G26 463 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 HHEXQ03014 270 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 TRIP10Q15642 601 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 CYP51A1Q16850 503 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 KIAA1614Q5VZ46 1190 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 NIPAL1Q6NVV3 410 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 FIGLAQ6QHK4 219 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 CYP2R1Q6VVX0 501 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 SLC30A8Q8IWU4 369 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 ZCCHC7Q8N3Z6 543 aaKnown RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 FAM160A2Q8N612 972 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 OR4A15Q8NGL6 344 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 OR10A6Q8NH74 314 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 ZFP28Q8NHY6 868 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 OR5P2Q8WZ92 322 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 GAL3ST3Q96A11 431 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 PPWD1Q96BP3 646 aaKnown RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 OR2A14Q96R47 310 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF184Q99676 751 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 MIR1-1HGQ9H1L0 117 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 COPS7BQ9H9Q2 264 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 TM9SF3Q9HD45 589 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 SLC6A20Q9NP91 592 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 HRASLS2Q9NWW9 162 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 ZSCAN32Q9NX65 697 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 THUMPD1Q9NXG2 353 aaKnown RBP12.83□□□□□ -0.36
PTCH1-215ENST00000547672 SPHK1Q9NYA1 384 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 TAS2R9Q9NYW1 312 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 EGFL7Q9UHF1 273 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 CSNK1G3Q9Y6M4 447 aa12.83□□□□□ -0.36
PTCH1-215ENST00000547672 IGKV1-8A0A0C4DH67 115 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 A0A0J9YY10 115 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 OR2A25A4D2G3 310 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SAP18O00422 153 aaKnown RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 BTN3A3O00478 584 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 HAT1O14929 419 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 BCAT2O15382 392 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SCN2BO60939 215 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 PIM1P11309 404 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 UGT2B7P16662 529 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ENGP17813 658 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 BCL6P41182 706 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 FASLGP48023 281 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 RXRGP48443 463 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ANXA11P50995 505 aaKnown RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 WNT3P56703 355 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 NXPH1P58417 271 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SKP1P63208 163 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 CYP4F2P78329 520 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 CHRNB3Q05901 458 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 FADDQ13158 208 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 VEZF1Q14119 521 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SUZ12Q15022 739 aaKnown RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 MLC1Q15049 377 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ZC3H12BQ5HYM0 836 aaKnown RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 TBCELQ5QJ74 424 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ADNP2Q6IQ32 1131 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SPESP1Q6UW49 350 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ABHD13Q7L211 337 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ASPGQ86U10 573 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 CALHM3Q86XJ0 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms