RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 NDC80O14777 642 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 AHSGP02765 367 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 CCDC175P0C221 793 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 MYBL2P10244 700 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 ZNF24P17028 368 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 MAOAP21397 527 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 HLCSP50747 726 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 CCR8P51685 355 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 GPR143P51810 404 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 ITGA8P53708 1063 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 CASP6P55212 293 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 EMC4Q5J8M3 183 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 DUPD1Q68J44 220 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 C3P1Q6ZMU1 363 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 SCUBE1Q8IWY4 988 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 CREB3L4Q8TEY5 395 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 SNF8Q96H20 258 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 HAUS8Q9BT25 410 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 TAS2R13Q9NYV9 303 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 ZFP69BQ9UJL9 534 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 OR1F1O43749 312 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 KRT38O76015 456 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 PGAM1P18669 254 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 JAK1P23458 1154 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 IVDP26440 423 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 AHRP35869 848 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 RGS4P49798 205 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 AP1S2P56377 157 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 OC90Q02509 493 aaPredicted RBP11.73□□□□□ -0.53
COPS7A-221ENST00000546229 CCDC137Q6PK04 289 aaKnown RBP11.73□□□□□ -0.53
COPS7A-221ENST00000546229 KIAA0408Q6ZU52 694 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 CA13Q8N1Q1 262 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 MYO1HQ8N1T3 1032 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 RPRMLQ8N4K4 120 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 ZFP62Q8NB50 900 aaPredicted RBP11.73□□□□□ -0.53
COPS7A-221ENST00000546229 TMEM52Q8NDY8 209 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 C16orf52Q8NHV5 167 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 FAM57AQ8TBR7 257 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 PHF3Q92576 2039 aaKnown RBP11.73□□□□□ -0.53
COPS7A-221ENST00000546229 MAGOHBQ96A72 148 aaKnown RBP11.73□□□□□ -0.53
COPS7A-221ENST00000546229 ZNF407Q9C0G0 2248 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 DEPPQ9NTK1 212 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 MAD1L1Q9Y6D9 718 aa11.73□□□□□ -0.53
COPS7A-221ENST00000546229 PRKNO60260 465 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-221ENST00000546229 B4GALT2O60909 372 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 MLYCDO95822 493 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-221ENST00000546229 ABOP16442 354 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 CYB561P49447 251 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 MEOX1P50221 254 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 HNRNPFP52597 415 aaKnown RBP11.72□□□□□ -0.53
COPS7A-221ENST00000546229 TAS2R50P59544 299 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 TERF2Q15554 542 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 MAPKAPK3Q16644 382 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 CD163Q86VB7 1156 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 SULF2Q8IWU5 870 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 PPIL6Q8IXY8 311 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 KLHDC8AQ8IYD2 350 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 POGLUT1Q8NBL1 392 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 SLC5A11Q8WWX8 675 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 PDLIM5Q96HC4 596 aaKnown RBP11.72□□□□□ -0.53
COPS7A-221ENST00000546229 TSNARE1Q96NA8 513 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 PELI2Q9HAT8 420 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 CLK4Q9HAZ1 481 aaKnown RBP11.72□□□□□ -0.53
COPS7A-221ENST00000546229 MCCC2Q9HCC0 563 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 ARL15Q9NXU5 204 aa11.72□□□□□ -0.53
COPS7A-221ENST00000546229 A0A0G2JMM0 328 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 A0A1W2PPB8 328 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 A0A1W2PRS3 328 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 PINLYPA6NC86 204 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 KIR3DP1A8MWS1 328 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 TP73O15350 636 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 NRDCO43847 1150 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 PRMT3O60678 531 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 WISP3O95389 354 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-221ENST00000546229 ENO2P09104 434 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-221ENST00000546229 ZNF37AP17032 561 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-221ENST00000546229 TFEBP19484 476 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 PPP2R1BP30154 601 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 GRK3P35626 688 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 RFC3P40938 356 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 FNTAP49354 379 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 RAB8AP61006 207 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 TLE4Q04727 773 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.53
COPS7A-221ENST00000546229 SPANXN3Q5MJ09 141 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 HECTD2Q5U5R9 776 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 STEAP4Q687X5 459 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 TRMT10BQ6PF06 316 aaKnown RBP11.71□□□□□ -0.53
COPS7A-221ENST00000546229 ABHD13Q7L211 337 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 VN1R5Q7Z5H4 357 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 FAM98AQ8NCA5 519 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms