RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SERPINB4P48594 390 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 NEK2P51955 445 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 RAB8AP61006 207 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 RPS18P62269 152 aaKnown RBP19.41■□□□□ 0.7
HMGA2-211ENST00000545998 DEFB134Q4QY38 66 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 FRG2Q64ET8 278 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 CCDC81Q6ZN84 652 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 CMTM7Q96FZ5 175 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 PKNOX2Q96KN3 472 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 FRG2BQ96QU4 278 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 F2RL3Q96RI0 385 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 CTSFQ9UBX1 484 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 MAP4K5Q9Y4K4 846 aa19.41■□□□□ 0.7
HMGA2-211ENST00000545998 KMT2BQ9UMN6 2715 aaPredicted RBP19.41■□□□□ 0.7
HMGA2-211ENST00000545998 IGLV3-12A0A075B6K2 115 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TMEM120BA0PK00 339 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 MAGEB17A8MXT2 336 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 FOXE1O00358 373 aaPredicted RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 ERI3O43414 337 aaKnown RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 KLF7O75840 302 aaPredicted RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 ESRRBO95718 433 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 B3GALT4O96024 378 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TGFB1P01137 390 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 CD63P08962 238 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SLC18A1P54219 525 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TMPRSS3P57727 454 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 NKG7Q16617 165 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TTMPQ5BVD1 217 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 C10orf62Q5T681 223 aaPredicted RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 FAM219BQ5XKK7 198 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TTC19Q6DKK2 380 aaPredicted RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 NIPAL1Q6NVV3 410 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 CDYL2Q8N8U2 506 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 OR2L5Q8NG80 312 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 OR6Y1Q8NGX8 325 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 STARD8Q92502 1023 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 CNDP1Q96KN2 507 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 ATP6V1G3Q96LB4 118 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SLC29A3Q9BZD2 475 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 WDR54Q9H977 334 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 CPNE5Q9HCH3 593 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 MID1IP1Q9NPA3 183 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 PSD3Q9NYI0 1048 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TCFL5Q9UL49 500 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 PPT2Q9UMR5 302 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 VSTM2BA6NLU5 285 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 RDH16O75452 317 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 CREG1O75629 220 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 ENO1P06733 434 aaKnown RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 RPS13P62277 151 aaKnown RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SKP1P63208 163 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 PHEXP78562 749 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 MAT1AQ00266 395 aaKnown RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 IFT88Q13099 833 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SYT16Q17RD7 645 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TMEM35AQ53FP2 167 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 DEPDC1Q5TB30 811 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 FAM69BQ5VUD6 431 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 CHSY3Q70JA7 882 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SREK1Q8WXA9 508 aaKnown RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 MTFMTQ96DP5 389 aaKnown RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 TRMOQ9BU70 441 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 OR51B5Q9H339 312 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 ELOVL6Q9H5J4 265 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 ZNF282Q9UDV7 671 aaPredicted RBP19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SNX6Q9UNH7 406 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 PADI2Q9Y2J8 665 aa19.4■□□□□ 0.7
HMGA2-211ENST00000545998 SCN2AQ99250 2005 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 ZNF860A6NHJ4 632 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 H3BQF6 201 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 K7ENP7 123 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 BIRC5O15392 142 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 NPHS1O60500 1241 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 SH3BGRLO75368 114 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 PTX3P26022 381 aaPredicted RBP19.39■□□□□ 0.69
HMGA2-211ENST00000545998 PLA2G16P53816 162 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 FOXL2P58012 376 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 KHDRBS2Q5VWX1 349 aaKnown RBP19.39■□□□□ 0.69
HMGA2-211ENST00000545998 TRIM40Q6P9F5 258 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 ABHD17CQ6PCB6 329 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 INO80CQ6PI98 192 aaPredicted RBP19.39■□□□□ 0.69
HMGA2-211ENST00000545998 ZCCHC23Q6ZST2 131 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 UBE3DQ7Z6J8 389 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 NUDCD3Q8IVD9 361 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 SHISA5Q8N114 240 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 METTL6Q8TCB7 284 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 QRFPRQ96P65 431 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 SPSB2Q99619 263 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 PRM3Q9NNZ6 103 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 MKKSQ9NPJ1 570 aaPredicted RBP19.39■□□□□ 0.69
HMGA2-211ENST00000545998 FARSBQ9NSD9 589 aaKnown RBP19.39■□□□□ 0.69
HMGA2-211ENST00000545998 TRPC4Q9UBN4 977 aa19.39■□□□□ 0.69
HMGA2-211ENST00000545998 A0A0G2JN53 185 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 ZNF891A8MT65 544 aaPredicted RBP19.38■□□□□ 0.69
HMGA2-211ENST00000545998 ETHE1O95571 254 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 RECKO95980 971 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 PDYNP01213 254 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 BTN3A2P78410 334 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 VAC14Q08AM6 782 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 TCHHL1Q5QJ38 904 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms