RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 PRKNO60260 465 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 B4GALT2O60909 372 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 OR6B1O95007 311 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 SSR4P51571 173 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 FOXO1Q12778 655 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 POU6F1Q14863 301 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 NAA25Q14CX7 972 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 ICE2Q659A1 982 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 TMEM214Q6NUQ4 689 aaKnown RBP14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 RAD9BQ6WBX8 426 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 KIAA0408Q6ZU52 694 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 MAATS1Q7Z4T9 603 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 VSIG1Q86XK7 387 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 KCT2Q8NC54 265 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 APCDD1LQ8NCL9 501 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 QKIQ96PU8 341 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 TBL1YQ9BQ87 522 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 PIGQQ9BRB3 760 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 IL1RL2Q9HB29 575 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 ABCF3Q9NUQ8 709 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 ZNF223Q9UK11 482 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 NAALAD2Q9Y3Q0 740 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 USF3Q68DE3 2245 aa14.24□□□□□ -0.13
CLSTN3-216ENST00000545663 MGAM2Q2M2H8 2515 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 PJA2O43164 708 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 TNNT1P13805 278 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 RBL1P28749 1068 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 SLC1A1P43005 524 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 DNASE1L1P49184 302 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 PRDX1Q06830 199 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 ACSF3Q4G176 576 aaPredicted RBP14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 ZNF662Q6ZS27 426 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 BZW1Q7L1Q6 419 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 PPFIBP2Q8ND30 876 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 SLC35G2Q8TBE7 412 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 PTCHD1Q96NR3 888 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 WDR83Q9BRX9 315 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 CARD6Q9BX69 1037 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 ANKHQ9HCJ1 492 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 JKAMPQ9P055 326 aa14.23□□□□□ -0.13
CLSTN3-216ENST00000545663 A8MVJ9 347 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 H7BY64 318 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 CASKO14936 926 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 ZSCAN12O43309 604 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 OR2J2O76002 312 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 SOX30O94993 753 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 EPPINO95925 133 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 B3GALT4O96024 378 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 TP53P04637 393 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 FHP07954 510 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 FAM157CP0CG43 387 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 MAOAP21397 527 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 FPR1P21462 350 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 CNR1P21554 472 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 CDKN2BP42772 138 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 OLR1P78380 273 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 CCZ1BP86790 482 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 CCZ1P86791 482 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 SEMA3AQ14563 771 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 GK5Q6ZS86 529 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 ABHD13Q7L211 337 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 RNF10Q8N5U6 811 aaKnown RBP14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 SMPDL3AQ92484 453 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 P3H4Q92791 437 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 ISL2Q96A47 359 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 PRAP1Q96NZ9 151 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 FAM173AQ9BQD7 235 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 PACSIN1Q9BY11 444 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 HPF1Q9NWY4 346 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 TUBA8Q9NY65 449 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 SPATA7Q9P0W8 599 aa14.22□□□□□ -0.13
CLSTN3-216ENST00000545663 DSCAMO60469 2012 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 DEFB108AA8MXU0 73 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 TLX2O43763 284 aaPredicted RBP14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 CD5LO43866 347 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 HCN1O60741 890 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 RFPL3SP0C7P2 107 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 SOX3P41225 446 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 RELAQ04206 551 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 LDB1Q86U70 411 aaPredicted RBP14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 SYCE1Q8N0S2 351 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 FBXW8Q8N3Y1 598 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 STYXQ8WUJ0 223 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 TBC1D20Q96BZ9 403 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 OR1F2PQ96R84 312 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 SLC6A15Q9H2J7 730 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 GALNT8Q9NY28 637 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 YARS2Q9Y2Z4 477 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 AAR2Q9Y312 384 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 HYOU1Q9Y4L1 999 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 EML6Q6ZMW3 1958 aa14.21□□□□□ -0.13
CLSTN3-216ENST00000545663 GOLGA6L9A6NEM1 432 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 IL2RAP01589 272 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 ERGP11308 486 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 TIMP3P35625 211 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 TRPC1P48995 793 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 CLCN2P51788 898 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 NAP1L1P55209 391 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms