RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TUBA3CQ13748 450 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 SLBPQ14493 270 aaKnown RBP eCLIP19.83■□□□□ 0.77
SCARB1-210ENST00000545493 ZKSCAN8Q15776 578 aaPredicted RBP19.83■□□□□ 0.77
SCARB1-210ENST00000545493 ZNF787Q6DD87 383 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 TUBA3EQ6PEY2 450 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 SLCO4C1Q6ZQN7 724 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 CA13Q8N1Q1 262 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 MDS2Q8NDY4 140 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 CDKL2Q92772 493 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 SIGLEC12Q96PQ1 595 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 CPNE1Q99829 537 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 HES7Q9BYE0 225 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 ABI3Q9P2A4 366 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 COPG2Q9UBF2 871 aa19.83■□□□□ 0.77
SCARB1-210ENST00000545493 IGKV3D-11A0A0A0MRZ8 115 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 TAPBPO15533 448 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 TBX6O95947 436 aaPredicted RBP19.82■□□□□ 0.76
SCARB1-210ENST00000545493 GNAZP19086 355 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 HNRNPH1P31943 449 aaKnown RBP19.82■□□□□ 0.76
SCARB1-210ENST00000545493 GMPRP36959 345 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 GP5P40197 560 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 SLC12A2P55011 1212 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 BTG2P78543 158 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 OR4D1Q15615 310 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 MEP1AQ16819 746 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 FBXO48Q5FWF7 155 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 ZNF766Q5HY98 468 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 C1QL3Q5VWW1 255 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 MAATS1Q7Z4T9 603 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 KIF2BQ8N4N8 673 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 SUN3Q8TAQ9 357 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 ELP5Q8TE02 316 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 GAL3ST3Q96A11 431 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 ANKRD10Q9NXR5 420 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 WWOXQ9NZC7 414 aa19.82■□□□□ 0.76
SCARB1-210ENST00000545493 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCARB1-210ENST00000545493 DIDO1Q9BTC0 2240 aaKnown RBP19.82■□□□□ 0.76
SCARB1-210ENST00000545493 TCRBV16S1A1N1A0A5B0 115 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 URADA6NGE7 173 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 SAGE2PA6NJ88 616 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 GABRR3A8MPY1 467 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 PRAMEF4O60810 478 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 CCDC166P0CW27 439 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 C1GALT1C1LP0DN25 315 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 MAOAP21397 527 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 DCTP40126 519 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 ACTN3Q08043 901 aaPredicted RBP19.81■□□□□ 0.76
SCARB1-210ENST00000545493 ILF2Q12905 390 aaKnown RBP19.81■□□□□ 0.76
SCARB1-210ENST00000545493 PRAMEF9Q5VWM5 478 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 ADNP2Q6IQ32 1131 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 ZDHHC24Q6UX98 284 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 VN1R5Q7Z5H4 357 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 TSPAN17Q96FV3 270 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 PTCHD1Q96NR3 888 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 PHACTR1Q9C0D0 580 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 RHBGQ9H310 441 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 NECTIN3Q9NQS3 549 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 GPRC5BQ9NZH0 403 aa19.81■□□□□ 0.76
SCARB1-210ENST00000545493 CENPEQ02224 2701 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 A0A0G2JN53 185 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 FAM227AF5H4B4 570 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 RNH1P13489 461 aaKnown RBP19.8■□□□□ 0.76
SCARB1-210ENST00000545493 OR1C1Q15619 314 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 TMIGD1Q6UXZ0 262 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 CYS1Q717R9 158 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 FJX1Q86VR8 437 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 LGI4Q8N135 537 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 TCAIMQ8N3R3 496 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 SLC5A8Q8N695 610 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 PDPRQ8NCN5 879 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 FBXO25Q8TCJ0 367 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 ESAMQ96AP7 390 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 MS4A6EQ96DS6 147 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 SCMH1Q96GD3 660 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 CLK4Q9HAZ1 481 aaKnown RBP19.8■□□□□ 0.76
SCARB1-210ENST00000545493 PRDM9Q9NQV7 894 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 TXNDC16Q9P2K2 825 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 ASB1Q9Y576 335 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 PCDHGB6Q9Y5F9 930 aa19.8■□□□□ 0.76
SCARB1-210ENST00000545493 ITPR2Q14571 2701 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 PRMT3O60678 531 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 ZG16O60844 167 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 WISP2O76076 250 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 UNC5CO95185 931 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 CRYABP02511 175 aaKnown RBP19.79■□□□□ 0.76
SCARB1-210ENST00000545493 STMN1P16949 149 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 GGT5P36269 586 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 CD96P40200 585 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 HSPA7P48741 367 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 STXBP1P61764 594 aaKnown RBP19.79■□□□□ 0.76
SCARB1-210ENST00000545493 EFTUD2Q15029 972 aaKnown RBP eCLIP19.79■□□□□ 0.762e-7■■■■■ 41.6
SCARB1-210ENST00000545493 TRADDQ15628 312 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 ZNF468Q5VIY5 522 aaPredicted RBP19.79■□□□□ 0.76
SCARB1-210ENST00000545493 GFRALQ6UXV0 394 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 TTLQ8NG68 377 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 DNAJB8Q8NHS0 232 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 UBXN10Q96LJ8 280 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 UTP23Q9BRU9 249 aaKnown RBP19.79■□□□□ 0.76
SCARB1-210ENST00000545493 DNAJC11Q9NVH1 559 aa19.79■□□□□ 0.76
SCARB1-210ENST00000545493 CLDN16Q9Y5I7 305 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms