RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC35G6P0C7Q6 338 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 SMIM10L1P0DMW3 83 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 ALOX12P18054 663 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 CLCN2P51788 898 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 GPR85P60893 370 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 PPIAP62937 165 aaKnown RBP13.7□□□□□ -0.22
RTN3-214ENST00000545432 CRADDP78560 199 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 SPA17Q15506 151 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 FBXL19-AS1Q494R0 122 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 RIPPLY2Q5TAB7 128 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 THEMIS2Q5TEJ8 643 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 TRILQ7L0X0 811 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 CILP2Q8IUL8 1156 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 PSD4Q8NDX1 1056 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 OR2M7Q8NG81 312 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 SPATA3Q8NHX4 192 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 FAM222BQ8WU58 562 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 ATG4AQ8WYN0 398 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 KCNJ9Q92806 393 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 FAM136AQ96C01 138 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 SMIM10Q96HG1 83 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 LACRTQ9GZZ8 138 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 NECTIN3Q9NQS3 549 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 BFARQ9NZS9 450 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
RTN3-214ENST00000545432 SH2B3Q9UQQ2 575 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 YARS2Q9Y2Z4 477 aaKnown RBP13.7□□□□□ -0.22
RTN3-214ENST00000545432 DHRS7Q9Y394 339 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 CLDN16Q9Y5I7 305 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 ZNF860A6NHJ4 632 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 EIF3FO00303 357 aaPredicted RBP13.69□□□□□ -0.22
RTN3-214ENST00000545432 AQP7O14520 342 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 SUSD5O60279 629 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 WDR1O75083 606 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 INHBBP09529 407 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 NPPBP16860 134 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 DGKQP52824 942 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 SESN2P58004 480 aaPredicted RBP13.69□□□□□ -0.22
RTN3-214ENST00000545432 TBPL1P62380 186 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 TTLL9Q3SXZ7 439 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 NDUFAF5Q5TEU4 345 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 KIAA0930Q6ICG6 404 aaPredicted RBP13.69□□□□□ -0.22
RTN3-214ENST00000545432 LCTLQ6UWM7 567 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 PRUNE1Q86TP1 453 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 C17orf64Q86WR6 236 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 TMEM156Q8N614 296 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 OR5M9Q8NGP3 310 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 OR10Q1Q8NGQ4 319 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 NT5CQ8TCD5 201 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 INTS10Q9NVR2 710 aaKnown RBP13.69□□□□□ -0.22
RTN3-214ENST00000545432 ZFATQ9P243 1243 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 PAK5Q9P286 719 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 B4GALT7Q9UBV7 327 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 AMFRQ9UKV5 643 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 CBLCQ9ULV8 474 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 SOX13Q9UN79 622 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 REXO2Q9Y3B8 237 aaKnown RBP13.69□□□□□ -0.22
RTN3-214ENST00000545432 PCDHGB3Q9Y5G1 929 aa13.69□□□□□ -0.22
RTN3-214ENST00000545432 EPN1Q9Y6I3 576 aaPredicted RBP13.69□□□□□ -0.22
RTN3-214ENST00000545432 FAM47E-STBD1D6RA91 191 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 E5RI56 91 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 GOLGA8TH3BQL2 631 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 B4GALT2O60909 372 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 IFNB1P01574 187 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 RAF1P04049 648 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 HEXAP06865 529 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 ETS1P14921 441 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 MAOAP21397 527 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
RTN3-214ENST00000545432 CYLC1P35663 651 aaPredicted RBP13.68□□□□□ -0.22
RTN3-214ENST00000545432 FOXO1Q12778 655 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 DEFB134Q4QY38 66 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 FLYWCH1Q4VC44 716 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 TMEM198Q66K66 360 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 ZNF549Q6P9A3 640 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 SLC22A16Q86VW1 577 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 UBL4BQ8N7F7 174 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 GOT1L1Q8NHS2 421 aaPredicted RBP13.68□□□□□ -0.22
RTN3-214ENST00000545432 HES6Q96HZ4 224 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 SH3GL2Q99962 352 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 TTTY12Q9BZ98 90 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 PLEKHF2Q9H8W4 249 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 KCMF1Q9P0J7 381 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 VPS9D1Q9Y2B5 631 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 LIPGQ9Y5X9 500 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 COL6A5A8TX70 2615 aa13.68□□□□□ -0.22
RTN3-214ENST00000545432 MPDZO75970 2070 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 TRBV11-1A0A0K0K1C0 115 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 KIAA1324LA8MWY0 1029 aaPredicted RBP13.67□□□□□ -0.22
RTN3-214ENST00000545432 ACOT7O00154 380 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 PRKNO60260 465 aaPredicted RBP13.67□□□□□ -0.22
RTN3-214ENST00000545432 SYF2O95926 243 aaKnown RBP13.67□□□□□ -0.22
RTN3-214ENST00000545432 CNR1P21554 472 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 CCND1P24385 295 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 GRK3P35626 688 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 SSR4P51571 173 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms