RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 GAL3ST3Q96A11 431 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 SMIM10Q96HG1 83 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 SCYL1Q96KG9 808 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 CCDC77Q9BR77 488 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 TUBB6Q9BUF5 446 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF700Q9H0M5 742 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 KLHL31Q9H511 634 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 SLAMF7Q9NQ25 335 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF490Q9ULM2 529 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-216ENST00000544996 IQANK1A0A1B0GTG1 560 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 ERI3O43414 337 aaKnown RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 CDC123O75794 336 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 WFS1O76024 890 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 B3GALT4O96024 378 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 SERPINA7P05543 415 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 RNH1P13489 461 aaKnown RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 PIK3CGP48736 1102 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 BTN3A2P78410 334 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 PCDH1Q08174 1060 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 Q0VFX4 171 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 SLC29A2Q14542 456 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 ABRAXAS2Q15018 415 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 PCBP2Q15366 365 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 NSDHLQ15738 373 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 TECRLQ5HYJ1 363 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 METTL2BQ6P1Q9 378 aaKnown RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 MED27Q6P2C8 311 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 TRIM40Q6P9F5 258 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 ADGRD1Q6QNK2 874 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 RIPOR1Q6ZS17 1223 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 CPEB2Q7Z5Q1 589 aaKnown RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 RBMXL3Q8N7X1 1067 aaKnown RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 OR2L5Q8NG80 312 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 PNPLA2Q96AD5 504 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 MS4A6EQ96DS6 147 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 MFRPQ9BY79 579 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 RBCK1Q9BYM8 510 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 TXLNGYQ9BZA5 131 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 REXO4Q9GZR2 422 aaKnown RBP14.83□□□□□ -0.04
CCDC78-216ENST00000544996 RHBGQ9H310 441 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 EPS8L2Q9H6S3 715 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 FETUBQ9UGM5 382 aa14.83□□□□□ -0.04
CCDC78-216ENST00000544996 MAGEB17A8MXT2 336 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 B3GALT2O43825 422 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 B4GALT2O60909 372 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 SMIM24O75264 130 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 WISP1O95388 367 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 UQCRHP07919 91 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 PRR35P0CG20 571 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 PCNAP12004 261 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 CD22P20273 847 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 SERPINB1P30740 379 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 HNRNPH1P31943 449 aaKnown RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 PLA2G16P53816 162 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 KCNC4Q03721 635 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 ACTN3Q08043 901 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 E2F2Q14209 437 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 PCOLCEQ15113 449 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 SLC6A19Q695T7 634 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 ISLR2Q6UXK2 745 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 TIFABQ6ZNK6 161 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 MYLK4Q86YV6 388 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 GSPT2Q8IYD1 628 aaKnown RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 SHISA5Q8N114 240 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 PLPP5Q8NEB5 264 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 SRFBP1Q8NEF9 429 aaKnown RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 MRPL57Q9BQC6 102 aaKnown RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 NPLQ9BXD5 320 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 ACTR8Q9H981 624 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 COPS7BQ9H9Q2 264 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 LANCL2Q9NS86 450 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 ZNF358Q9NW07 568 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 XPR1Q9UBH6 696 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 ADGRE2Q9UHX3 823 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 B3GNT3Q9Y2A9 372 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 FASNP49327 2511 aaKnown RBP14.82□□□□□ -0.04
CCDC78-216ENST00000544996 CCDC88CQ9P219 2028 aa14.82□□□□□ -0.04
CCDC78-216ENST00000544996 OR2W5A6NFC9 320 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 PYCARD-AS1I3L0S3 204 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 PRMT3O60678 531 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 DNAJB6O75190 326 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 EFNA3P52797 238 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 MLLT10P55197 1068 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 RHAGQ02094 409 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 GTF2H2Q13888 395 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 RCN2Q14257 317 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 ADPRMQ3LIE5 342 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 CRB2Q5IJ48 1285 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 LIPJQ5W064 366 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 GRHL2Q6ISB3 625 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 GTF2H2CQ6P1K8 395 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 LANCL3Q6ZV70 420 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 CHSY3Q70JA7 882 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 VN1R5Q7Z5H4 357 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 ANKRD37Q7Z713 158 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 LAS2Q8IYD9 372 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 EFCAB3Q8N7B9 438 aa14.81□□□□□ -0.04
CCDC78-216ENST00000544996 PTGR2Q8N8N7 351 aaPredicted RBP14.81□□□□□ -0.04
CCDC78-216ENST00000544996 ARMC2Q8NEN0 867 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms