RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NXNL1Q96CM4 212 aa21.93■■□□□ 1.1
CHFR-222ENST00000544093 SCN2AQ99250 2005 aa21.93■■□□□ 1.1
CHFR-222ENST00000544093 ZBTB20Q9HC78 741 aaPredicted RBP21.93■■□□□ 1.1
CHFR-222ENST00000544093 OPTCQ9UBM4 332 aa21.93■■□□□ 1.1
CHFR-222ENST00000544093 TEKT2Q9UIF3 430 aa21.93■■□□□ 1.1
CHFR-222ENST00000544093 A0A087WUV0 522 aaPredicted RBP21.92■■□□□ 1.1
CHFR-222ENST00000544093 HMX2A2RU54 273 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 PSMD12O00232 456 aaPredicted RBP21.92■■□□□ 1.1
CHFR-222ENST00000544093 KRT38O76015 456 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 UQCRHP07919 91 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 RNH1P13489 461 aaKnown RBP21.92■■□□□ 1.1
CHFR-222ENST00000544093 HNF4AP41235 474 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 CASP2P42575 452 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 KCNC1P48547 511 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 EFNA3P52797 238 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 RAB8AP61006 207 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 RHAGQ02094 409 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 IRF8Q02556 426 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 ABRAXAS2Q15018 415 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 NSDHLQ15738 373 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 EXT1Q16394 746 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 ANKRD37Q7Z713 158 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 CNPY4Q8N129 248 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 DNAJB14Q8TBM8 379 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 BRIX1Q8TDN6 353 aaKnown RBP21.92■■□□□ 1.1
CHFR-222ENST00000544093 KCTD4Q8WVF5 259 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 NPLQ9BXD5 320 aaPredicted RBP21.92■■□□□ 1.1
CHFR-222ENST00000544093 RHBGQ9H310 441 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 LANCL2Q9NS86 450 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 LUZP4Q9P127 313 aa21.92■■□□□ 1.1
CHFR-222ENST00000544093 DYTNA2CJ06 578 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 LRIT2A6NDA9 550 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 K7EPI3 171 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 UBXN8O00124 270 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 ALDOAP04075 364 aaKnown RBP21.91■■□□□ 1.1
CHFR-222ENST00000544093 SERPINB1P30740 379 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 SOX11P35716 441 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 PCDH1Q08174 1060 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 TGM3Q08188 693 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 DOC2AQ14183 400 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 E2F2Q14209 437 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 METTL2BQ6P1Q9 378 aaKnown RBP21.91■■□□□ 1.1
CHFR-222ENST00000544093 QSOX2Q6ZRP7 698 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 LINC00696Q6ZRV3 163 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 ADAMTS18Q8TE60 1221 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 CCT6BQ92526 530 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 PSMF1Q92530 271 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 ISL2Q96A47 359 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 ESAMQ96AP7 390 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 PAFAH2Q99487 392 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 LPAR4Q99677 370 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 PTGFRNQ9P2B2 879 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 ZNF180Q9UJW8 692 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 PCDHGA10Q9Y5H3 936 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 SHANK1Q9Y566 2161 aa21.91■■□□□ 1.1
CHFR-222ENST00000544093 CDC123O75794 336 aaPredicted RBP21.9■■□□□ 1.1
CHFR-222ENST00000544093 EPB42P16452 691 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 MSH2P43246 934 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 CHIT1Q13231 466 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 ADPRMQ3LIE5 342 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 FBXO48Q5FWF7 155 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 TRIM40Q6P9F5 258 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 LANCL3Q6ZV70 420 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 SRFBP1Q8NEF9 429 aaKnown RBP21.9■■□□□ 1.1
CHFR-222ENST00000544093 OR2L5Q8NG80 312 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 MS4A6EQ96DS6 147 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 REXO4Q9GZR2 422 aaKnown RBP21.9■■□□□ 1.1
CHFR-222ENST00000544093 RNF32Q9H0A6 362 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 KLHL31Q9H511 634 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 MAP10Q9P2G4 905 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 CPAMD8Q8IZJ3 1885 aa21.9■■□□□ 1.1
CHFR-222ENST00000544093 ERI3O43414 337 aaKnown RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 PRMT3O60678 531 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 SEC24DO94855 1032 aaPredicted RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 ZIC2O95409 532 aaPredicted RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 MTHFD2P13995 350 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 GFAPP14136 432 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 GMPRP36959 345 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 TSFMP43897 325 aaKnown RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 ALDH18A1P54886 795 aaKnown RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 OLR1P78380 273 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 BTN3A2P78410 334 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 ARG2P78540 354 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 IRF9Q00978 393 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 ACTN3Q08043 901 aaPredicted RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 RCN2Q14257 317 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 NAA30Q147X3 362 aaPredicted RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 ZNF169Q14929 603 aaPredicted RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 SETDB1Q15047 1291 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 BTBD16Q32M84 506 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 CUZD1Q86UP6 607 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 ARMC2Q8NEN0 867 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 M1APQ8TC57 530 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 SNRNP40Q96DI7 357 aaKnown RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 RBCK1Q9BYM8 510 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 VPS11Q9H270 941 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 AGPAT4Q9NRZ5 378 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 ADGRE2Q9UHX3 823 aa21.89■■□□□ 1.09
CHFR-222ENST00000544093 ZNF490Q9ULM2 529 aaPredicted RBP21.89■■□□□ 1.09
CHFR-222ENST00000544093 TMCO1Q9UM00 188 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms