RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MAPK12P53778 367 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 CLCA4Q14CN2 919 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 DEPDC1Q5TB30 811 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 ADCK2Q7Z695 626 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 GALNT10Q86SR1 603 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 F2RL3Q96RI0 385 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 OSBPL10Q9BXB5 764 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 XKR8Q9H6D3 395 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 MVB12BQ9H7P6 319 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 BAG5Q9UL15 447 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 NUP214P35658 2090 aaPredicted RBP16.32■□□□□ 0.2
PTPRO-209ENST00000543886 OR1F1O43749 312 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 DRD1P21728 446 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 PKLRP30613 574 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 PCGF2P35227 344 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 CRATP43155 626 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 EPS8Q12929 822 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 C16orf72Q14CZ0 275 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 UAP1L1Q3KQV9 507 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 USP51Q70EK9 711 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 EIF3MQ7L2H7 374 aaKnown RBP16.32■□□□□ 0.2
PTPRO-209ENST00000543886 C11orf65Q8NCR3 313 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 OR2L8Q8NGY9 312 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 QRFPRQ96P65 431 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 SMURF2Q9HAU4 748 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 IL1RAPQ9NPH3 570 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 USE1Q9NZ43 259 aa16.32■□□□□ 0.2
PTPRO-209ENST00000543886 OR52A4PA6NMU1 304 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 CAPN5O15484 640 aaPredicted RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 OR6B1O95007 311 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 FKBP9O95302 570 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 FABP3P05413 133 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 NUDT7P0C024 238 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 CHI3L1P36222 383 aaPredicted RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 LTBRP36941 435 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 DCTP40126 519 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 TUBA4AP68366 448 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 PPP2R2BQ00005 443 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 TEAD4Q15561 434 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 USP30Q70CQ3 517 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 CBLL1Q75N03 491 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 HIPK1Q86Z02 1210 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 HS3ST5Q8IZT8 346 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 NAGSQ8N159 534 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 HSH2DQ96JZ2 352 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 MSLNLQ96KJ4 702 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 A0A1W2PRB8 838 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 PRSS38A1L453 326 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 SCAMP1O15126 338 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 NDUFS4O43181 175 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 MRPS21P82921 87 aaKnown RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 PRDX1Q06830 199 aaKnown RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 SFSWAPQ12872 951 aaKnown RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 MPEG1Q2M385 716 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 KIAA1324Q6UXG2 1013 aaKnown RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 RBM44Q6ZP01 1051 aaKnown RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 ASB12Q8WXK4 309 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 MAL2Q969L2 176 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 OR2M4Q96R27 311 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 TOR3AQ9H497 397 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 FGF22Q9HCT0 170 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 PRDM8Q9NQV8 689 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 ADPRHL2Q9NX46 363 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 TAS2R9Q9NYW1 312 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 IFT80Q9P2H3 777 aaPredicted RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 WBP11Q9Y2W2 641 aaKnown RBP16.31■□□□□ 0.2
PTPRO-209ENST00000543886 AP1M2Q9Y6Q5 423 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 U3KQV3 271 aa16.31■□□□□ 0.2
PTPRO-209ENST00000543886 PRR19A6NJB7 356 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 RTCAO00442 366 aaKnown RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 NOBOXO60393 691 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TBX6O95947 436 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 DDX5P17844 614 aaKnown RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SOAT1P35610 550 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 BSGP35613 385 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 CSNK1G2P78368 415 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 PPP1R8Q12972 351 aaKnown RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 GCNT6Q5T4J0 391 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ZNF852Q6ZMS4 543 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 VTCN1Q7Z7D3 282 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 NUDT13Q86X67 352 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SMRP1Q8NCR6 262 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ZNF555Q8NEP9 628 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 OR52N2Q8NGI0 321 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 OR52E1Q8NGJ3 308 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 RGMAQ96B86 450 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 DGCR14Q96DF8 476 aaKnown RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SCARF2Q96GP6 870 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TPD52L3Q96J77 140 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ZNF717Q9BY31 904 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SLC6A16Q9GZN6 736 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 C8orf33Q9H7E9 229 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TM9SF3Q9HD45 589 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TAAR2Q9P1P5 351 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ABCG2Q9UNQ0 655 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ORC6Q9Y5N6 252 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 HEBP2Q9Y5Z4 205 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms