RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TMEM35AQ53FP2 167 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 TTC19Q6DKK2 380 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 CCDC81Q6ZN84 652 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 CHSY3Q70JA7 882 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 NUDCD3Q8IVD9 361 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 RNF175Q8N4F7 328 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 GOLGA6L1Q8N7Z2 621 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 CDYL2Q8N8U2 506 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 AMER3Q8N944 861 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 OR2L5Q8NG80 312 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 F2RL3Q96RI0 385 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 MTERF1Q99551 399 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 SLC29A3Q9BZD2 475 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 ACTL8Q9H568 366 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 PRM3Q9NNZ6 103 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 MID1IP1Q9NPA3 183 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 ZNF446Q9NWS9 450 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 PPT2Q9UMR5 302 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 SNX6Q9UNH7 406 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 PADI2Q9Y2J8 665 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 MAP4K5Q9Y4K4 846 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 IGLV3-12A0A075B6K2 115 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 MAGEB17A8MXT2 336 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 SGK494L7N484 410 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ERI3O43414 337 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 NPHS1O60500 1241 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 CNOT3O75175 753 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ENO1P06733 434 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 PTX3P26022 381 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 CCR10P46092 362 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 RPS13P62277 151 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 TGM3Q08188 693 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 NKG7Q16617 165 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 TTMPQ5BVD1 217 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 DEPDC1Q5TB30 811 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 KHDRBS2Q5VWX1 349 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 TRIM40Q6P9F5 258 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ABHD17CQ6PCB6 329 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ANKRD42Q8N9B4 389 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 SRFBP1Q8NEF9 429 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 OR6Y1Q8NGX8 325 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 METTL6Q8TCB7 284 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 STARD8Q92502 1023 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 OR51B5Q9H339 312 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ACBD3Q9H3P7 528 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ELOVL6Q9H5J4 265 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 WDR54Q9H977 334 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 TRPC4Q9UBN4 977 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 CTSFQ9UBX1 484 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 ZNF282Q9UDV7 671 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 TCFL5Q9UL49 500 aa16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 MRPS18BQ9Y676 258 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-203ENST00000543002 VSTM2BA6NLU5 285 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 RDH16O75452 317 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 CREG1O75629 220 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 KLF7O75840 302 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 RECKO95980 971 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 B3GALT4O96024 378 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 KRT6AP02538 564 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 KRT6BP04259 564 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 HMOX2P30519 316 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 SERPINB5P36952 375 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 KRT6CP48668 564 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 PLA2G16P53816 162 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 TMPRSS3P57727 454 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 RPS18P62269 152 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 MAT1AQ00266 395 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 OCA2Q04671 838 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 ZCCHC23Q6ZST2 131 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 UBE3DQ7Z6J8 389 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 ZSCAN1Q8NBB4 408 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 MTFMTQ96DP5 389 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 FAR2Q96K12 515 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 QRFPRQ96P65 431 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 MKKSQ9NPJ1 570 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 NXT1Q9UKK6 140 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 SCN3AQ9NY46 2000 aa16.2■□□□□ 0.18
RABGGTA-203ENST00000543002 A0A088AWK7 358 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 WDR91A4D1P6 747 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 ZNF860A6NHJ4 632 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 ZNF891A8MT65 544 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 HMGB1P1B2RPK0 211 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 K7ENP7 123 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 MANBAO00462 879 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 SH3BGRLO75368 114 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 ZNF10P21506 573 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 ARFIP1P53367 373 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 WDR4P57081 412 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 BTN3A2P78410 334 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 MC1RQ01726 317 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 VAC14Q08AM6 782 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 GALNT1Q10472 559 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 CUL3Q13618 768 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 RCN2Q14257 317 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 SYT16Q17RD7 645 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 CRTC2Q53ET0 693 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 SGO1Q5FBB7 561 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 HHATQ5VTY9 493 aa16.19■□□□□ 0.18
RABGGTA-203ENST00000543002 INO80CQ6PI98 192 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms