RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TEX26Q8N6G2 289 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 ZFP41Q8N8Y5 198 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 OR7G3Q8NG95 312 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 SLC35G5Q96KT7 338 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 SPACA7Q96KW9 195 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 SLC38A2Q96QD8 506 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 GAL3ST1Q99999 423 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 EFCAB11Q9BUY7 163 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 TRIT1Q9H3H1 467 aaKnown RBP15.51■□□□□ 0.07
VARS2-212ENST00000542001 ARHGEF33A8MVX0 844 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 NDUFS4O43181 175 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 NFATC1O95644 943 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 PRG2P13727 222 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 TCEA1P23193 301 aaKnown RBP15.51■□□□□ 0.07
VARS2-212ENST00000542001 MGAT3Q09327 533 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 GAREM2Q75VX8 874 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 SLC5A11Q8WWX8 675 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 NEIL2Q969S2 332 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 Q96MT0 163 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 TIGARQ9NQ88 270 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 CACNB4O00305 520 aaPredicted RBP15.51■□□□□ 0.07
VARS2-212ENST00000542001 TPD52L2O43399 206 aaKnown RBP15.51■□□□□ 0.07
VARS2-212ENST00000542001 FCER2P06734 321 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 MATN1P21941 496 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 CLCN7P51798 805 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 CEP78Q5JTW2 689 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 MACC1Q6ZN28 852 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 DPEP2Q9H4A9 486 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 IKZF5Q9H5V7 419 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 PCDHA9Q9Y5H5 950 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 IGLV3-25P01717 112 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 OPRL1P41146 370 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 NKX2-5P52952 324 aaPredicted RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 ZNF763Q0D2J5 394 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 NPRL3Q12980 569 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 ADNP2Q6IQ32 1131 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 OLIG3Q7RTU3 272 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 DCP2Q8IU60 420 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 LGALS12Q96DT0 336 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 RBCK1Q9BYM8 510 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 TM9SF3Q9HD45 589 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 PMF1-BGLAPU3KQ54 211 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 ABHD14A-ACY1A0A1B0GW23 586 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 EPCAMP16422 314 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 PIGAP37287 484 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 XKP51811 444 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 TEFMQ96QE5 360 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 FAM120CQ9NX05 1096 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 CD300AQ9UGN4 299 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 KRBA1A5PL33 1030 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 FXYD1O00168 92 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 FRS3O43559 492 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 RPLP0P05388 317 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 HOXC13P31276 330 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 TLX1P31314 330 aaPredicted RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 CCT3P49368 545 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 RPL26P61254 145 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 ATG9BQ674R7 924 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 ARMCX6Q7L4S7 300 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 SHFQ7M4L6 423 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 COMMD6Q7Z4G1 85 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 OR4N5Q8IXE1 308 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 OR9A1PQ8NGU1 263 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 HDAC2Q92769 488 aaKnown RBP15.5■□□□□ 0.07
VARS2-212ENST00000542001 GIN1Q9NXP7 522 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 SPATA2Q9UM82 520 aa15.5■□□□□ 0.07
VARS2-212ENST00000542001 BCAS1O75363 584 aaPredicted RBP15.49■□□□□ 0.07
VARS2-212ENST00000542001 ANXA8P13928 327 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 MAGEA10P43363 369 aaPredicted RBP15.49■□□□□ 0.07
VARS2-212ENST00000542001 CLCN2P51788 898 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 RUNDC3AQ59EK9 446 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 TMPRSS11AQ6ZMR5 421 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 CARM1Q86X55 608 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 SPRTNQ9H040 489 aaPredicted RBP15.49■□□□□ 0.07
VARS2-212ENST00000542001 SOHLH2Q9NX45 425 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 RNF6Q9Y252 685 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 PDE9AO76083 593 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 OR12D1P0DN82 309 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 JUPP14923 745 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 IFNGR2P38484 337 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 SLC36A3Q495N2 470 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 WDR53Q7Z5U6 358 aaPredicted RBP15.49■□□□□ 0.07
VARS2-212ENST00000542001 NDNFQ8TB73 568 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 STOX2Q9P2F5 926 aaPredicted RBP15.49■□□□□ 0.07
VARS2-212ENST00000542001 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.49■□□□□ 0.07
VARS2-212ENST00000542001 TMEM202A6NGA9 273 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 GUCY1B2O75343 617 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 LAMP2P13473 410 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 KELP23276 732 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 HRH2P25021 359 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 MOGQ16653 247 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 UGT3A2Q3SY77 523 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 TPRG1LQ5T0D9 272 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 SLC8B1Q6J4K2 584 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 AKAP14Q86UN6 197 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 TMEM151AQ8N4L1 468 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 IQCF1Q8N6M8 205 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 GAB3Q8WWW8 586 aa15.49■□□□□ 0.07
VARS2-212ENST00000542001 ZBED6CLQ96FA7 236 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms