RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 LAMA1P25391 3075 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TRBC2A0A5B9 178 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 ARHGAP10A1A4S6 786 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 LMO7DNF2Z398 122 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 SAP18O00422 153 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 SDC3O75056 442 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 EEDO75530 441 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 RAE1P78406 368 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 FLOT2Q14254 428 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 CAPRIN1Q14444 709 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 C16orf87Q6PH81 154 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 SLC2A7Q6PXP3 512 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 NCCRP1Q6ZVX7 275 aaPredicted RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 NANOGNBQ7Z5D8 188 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 SYT12Q8IV01 421 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 SDR16C5Q8N3Y7 309 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TBC1D19Q8N5T2 526 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TTLQ8NG68 377 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 GPATCH1Q9BRR8 931 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 CLMPQ9H6B4 373 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 CROTQ9UKG9 612 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 PRPF19Q9UMS4 504 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 KLHL20Q9Y2M5 609 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 GNG14A0A1W2PPG7 69 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 HAT1O14929 419 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 LCMT2O60294 686 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 DNAJA2O60884 412 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 PIAS2O75928 621 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TBX6O95947 436 aaPredicted RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 ANXA6P08133 673 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 ANXA4P09525 319 aaPredicted RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 UGT2B7P16662 529 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TIA1P31483 386 aaKnown RBP eCLIP8.3□□□□□ -1.083e-6■■■■□ 21.3
THBS3-210ENST00000541576 MAZP56270 477 aaKnown RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 MYBPC1Q00872 1141 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 FAM174BQ3ZCQ3 159 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 GALNT18Q6P9A2 607 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 COMMD6Q7Z4G1 85 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 ZNF761Q86XN6 746 aaPredicted RBP8.3□□□□□ -1.08
THBS3-210ENST00000541576 NCSTNQ92542 709 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 OR2A14Q96R47 310 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 MS4A8Q9BY19 250 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TRIM8Q9BZR9 551 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 TWSG1Q9GZX9 223 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 INIPQ9NRY2 104 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 GID8Q9NWU2 228 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 HRASLS2Q9NWW9 162 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 ACTR10Q9NZ32 417 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 ENTPD2Q9Y5L3 495 aa8.3□□□□□ -1.08
THBS3-210ENST00000541576 C2orf74A8MZ97 194 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PCDH7O60245 1069 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 LRATO95237 230 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 IL6P05231 212 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 FAM58BPP0C7Q3 252 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 NR4A1P22736 598 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 BCL6P41182 706 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 GRIA3P42263 894 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 TMED10P49755 219 aaKnown RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 PHC1P78364 1004 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 MS4A2Q01362 244 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 DEFB133Q30KQ1 61 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PLK5Q496M5 336 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SPANXN4Q5MJ08 99 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 DEPDC1Q5TB30 811 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 KHDRBS2Q5VWX1 349 aaKnown RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 ZNF425Q6IV72 752 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 CYP2R1Q6VVX0 501 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SLC7A5P1Q8MH63 180 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 METTL4Q8N3J2 472 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 ARL14Q8N4G2 192 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 DTWD2Q8NBA8 298 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 CDC26Q8NHZ8 85 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 FLVCR1-AS1Q8TAF5 88 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 GFM2Q969S9 779 aaKnown RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 LRRC58Q96CX6 371 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 Q9H521 79 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 ERVMER34-1Q9H9K5 563 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 TMEM74BQ9NUR3 256 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 UCKL1Q9NWZ5 548 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SIRT5Q9NXA8 310 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 AHSPQ9NZD4 102 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 ADA2Q9NZK5 511 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SUSD2Q9UGT4 822 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 TP53BP1Q12888 1972 aaPredicted RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 A8MU76 341 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PDLIM1O00151 329 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 ZW10O43264 779 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 CLEC3AO75596 197 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SEMA3DO95025 777 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 SERPIND1P05546 499 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PGRP06401 933 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 PRPS1L1P21108 318 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 CTSKP43235 329 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 ASMTP46597 345 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 FASLGP48023 281 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
THBS3-210ENST00000541576 PLIN5Q00G26 463 aa8.29□□□□□ -1.08
THBS3-210ENST00000541576 NFYCQ13952 458 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms