RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 B4GALT2O60909 372 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 CD99P14209 185 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 DNAJA1P31689 397 aaKnown RBP25.03■■□□□ 1.6
CHFR-218ENST00000540963 SLC1A2P43004 574 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 RGS4P49798 205 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 RGS1Q08116 209 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 TERF2Q15554 542 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 ZNF662Q6ZS27 426 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 CAND1Q86VP6 1230 aaKnown RBP25.03■■□□□ 1.6
CHFR-218ENST00000540963 TMEM200AQ86VY9 491 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 CYP4Z2PQ8N1L4 340 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 ARMC2Q8NEN0 867 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 NT5CQ8TCD5 201 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 AARSD1Q9BTE6 412 aaKnown RBP25.03■■□□□ 1.6
CHFR-218ENST00000540963 ATG10Q9H0Y0 220 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 CXXC4Q9H2H0 198 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 HOMER3Q9NSC5 361 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 ADAMTS6Q9UKP5 1117 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 NKX2-6A6NCS4 301 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 SDR42E2A6NKP2 422 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 FAM90A27PA6NNH2 459 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 OR1F1O43749 312 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 DIAPH2O60879 1101 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 CLCN2P51788 898 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 CLYBLQ8N0X4 340 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 APCDD1LQ8NCL9 501 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 NINJ1Q92982 152 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 FOXC2Q99958 501 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 UCK2Q9BZX2 261 aa25.02■■□□□ 1.6
CHFR-218ENST00000540963 TRMT6Q9UJA5 497 aaKnown RBP25.02■■□□□ 1.6
CHFR-218ENST00000540963 URADA6NGE7 173 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 HIST1H2AGP0C0S8 130 aaPredicted RBP25.01■■□□□ 1.59
CHFR-218ENST00000540963 HIST1H2ADP20671 130 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 AHRP35869 848 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 KCNJ1P48048 391 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 BTG2P78543 158 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 TMEM156Q8N614 296 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 CHDHQ8NE62 594 aaPredicted RBP25.01■■□□□ 1.59
CHFR-218ENST00000540963 B3GNT7Q8NFL0 401 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 HIST1H2AHQ96KK5 128 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 HIST1H2AJQ99878 128 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 H2AFJQ9BTM1 129 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 XAB2Q9HCS7 855 aaKnown RBP25.01■■□□□ 1.59
CHFR-218ENST00000540963 ZFP69BQ9UJL9 534 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 FBXO5Q9UKT4 447 aa25.01■■□□□ 1.59
CHFR-218ENST00000540963 PPIEQ9UNP9 301 aaKnown RBP25.01■■□□□ 1.59
CHFR-218ENST00000540963 PSMD12O00232 456 aaPredicted RBP25■■□□□ 1.59
CHFR-218ENST00000540963 DNAJB6O75190 326 aa25■■□□□ 1.59
CHFR-218ENST00000540963 NADKO95544 446 aaPredicted RBP25■■□□□ 1.59
CHFR-218ENST00000540963 ZNF888P0CJ79 500 aaPredicted RBP25■■□□□ 1.59
CHFR-218ENST00000540963 RNH1P13489 461 aaKnown RBP25■■□□□ 1.59
CHFR-218ENST00000540963 RFC3P40938 356 aa25■■□□□ 1.59
CHFR-218ENST00000540963 OLR1P78380 273 aa25■■□□□ 1.59
CHFR-218ENST00000540963 CCZ1BP86790 482 aa25■■□□□ 1.59
CHFR-218ENST00000540963 CCZ1P86791 482 aaPredicted RBP25■■□□□ 1.59
CHFR-218ENST00000540963 FOLH1Q04609 750 aa25■■□□□ 1.59
CHFR-218ENST00000540963 EMC4Q5J8M3 183 aa25■■□□□ 1.59
CHFR-218ENST00000540963 DUPD1Q68J44 220 aa25■■□□□ 1.59
CHFR-218ENST00000540963 MBOAT1Q6ZNC8 495 aa25■■□□□ 1.59
CHFR-218ENST00000540963 RGS9BPQ6ZS82 235 aa25■■□□□ 1.59
CHFR-218ENST00000540963 SPNS2Q8IVW8 549 aa25■■□□□ 1.59
CHFR-218ENST00000540963 GPALPP1Q8IXQ4 340 aa25■■□□□ 1.59
CHFR-218ENST00000540963 MYRIPQ8NFW9 859 aa25■■□□□ 1.59
CHFR-218ENST00000540963 EEF1AKMT1Q8WVE0 214 aa25■■□□□ 1.59
CHFR-218ENST00000540963 ALKBH8Q96BT7 664 aaKnown RBP25■■□□□ 1.59
CHFR-218ENST00000540963 SNF8Q96H20 258 aa25■■□□□ 1.59
CHFR-218ENST00000540963 SEC16BQ96JE7 1060 aa25■■□□□ 1.59
CHFR-218ENST00000540963 TIMMDC1Q9NPL8 285 aa25■■□□□ 1.59
CHFR-218ENST00000540963 LZTFL1Q9NQ48 299 aa25■■□□□ 1.59
CHFR-218ENST00000540963 KLK8O60259 260 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 HAUS5O94927 633 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 TUBB4AP04350 444 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 MAOAP21397 527 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 IST1P53990 364 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 DHX9Q08211 1270 aaKnown RBP24.99■■□□□ 1.59
CHFR-218ENST00000540963 LRRC8AQ8IWT6 810 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 MYO1HQ8N1T3 1032 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 MCUQ8NE86 351 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 OR52N2Q8NGI0 321 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 OR56A3Q8NH54 315 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 UTP15Q8TED0 518 aaKnown RBP24.99■■□□□ 1.59
CHFR-218ENST00000540963 TAS2R13Q9NYV9 303 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 MMACHCQ9Y4U1 282 aa24.99■■□□□ 1.59
CHFR-218ENST00000540963 ZNF469Q96JG9 3925 aaPredicted RBP24.98■■□□□ 1.59
CHFR-218ENST00000540963 ITGA10O75578 1167 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 FGGP02679 453 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 F7P08709 466 aaPredicted RBP24.98■■□□□ 1.59
CHFR-218ENST00000540963 SCTRP47872 440 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 AP1S2P56377 157 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 NUP107P57740 925 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 PMPCAQ10713 525 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 BBS9Q3SYG4 887 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 MDGA2Q7Z553 956 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 CCDC71Q8IV32 467 aaPredicted RBP24.98■■□□□ 1.59
CHFR-218ENST00000540963 GPATCH11Q8N954 259 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 FAM167BQ9BTA0 163 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 SLC6A16Q9GZN6 736 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 NECTIN3Q9NQS3 549 aa24.98■■□□□ 1.59
CHFR-218ENST00000540963 C20orf96Q9NUD7 363 aaPredicted RBP24.98■■□□□ 1.59
CHFR-218ENST00000540963 ZFATQ9P243 1243 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms