RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 MFSD4BQ5TF39 518 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 TRIM40Q6P9F5 258 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 TMEM205Q6UW68 189 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 NDUFAF7Q7L592 441 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 GOLGA7Q7Z5G4 137 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 VN1R5Q7Z5H4 357 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 ZNF605Q86T29 641 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 SRFBP1Q8NEF9 429 aaKnown RBP12.65□□□□□ -0.38
CCDC130-202ENST00000540216 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 TBC1D20Q96BZ9 403 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 REPS1Q96D71 796 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 MS4A6EQ96DS6 147 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 NPLQ9BXD5 320 aaPredicted RBP12.65□□□□□ -0.38
CCDC130-202ENST00000540216 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
CCDC130-202ENST00000540216 RIC8BQ9NVN3 520 aa12.65□□□□□ -0.38
CCDC130-202ENST00000540216 C19orf25Q9UFG5 118 aaPredicted RBP12.65□□□□□ -0.38
CCDC130-202ENST00000540216 SCN3AQ9NY46 2000 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 IGHV1-45A0A0A0MS14 117 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 NSG1A0A0A6YYJ2 146 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 A6NL46 340 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ERI3O43414 337 aaKnown RBP12.64□□□□□ -0.39
CCDC130-202ENST00000540216 SUV39H1O43463 412 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 CHST10O43529 356 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 DPM1O60762 260 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 CDH16O75309 829 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 JRKO75564 520 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 FHP07954 510 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 COX6A1P12074 109 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 RNH1P13489 461 aaKnown RBP12.64□□□□□ -0.39
CCDC130-202ENST00000540216 TAC1P20366 129 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ITGA3P26006 1051 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 EEF1DP29692 281 aaKnown RBP12.64□□□□□ -0.39
CCDC130-202ENST00000540216 HNRNPH1P31943 449 aaKnown RBP12.64□□□□□ -0.39
CCDC130-202ENST00000540216 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 RAB8AP61006 207 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 PHEXP78562 749 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 TMEM35AQ53FP2 167 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 EMBQ6PCB8 327 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ATG14Q6ZNE5 492 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 RIPOR1Q6ZS17 1223 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 OR7G3Q8NG95 312 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 OR5T3Q8NGG3 340 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
CCDC130-202ENST00000540216 MZB1Q8WU39 189 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 C8orf44Q96CB5 159 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 PHF21BQ96EK2 531 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 PEX11GQ96HA9 241 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 KCNC2Q96PR1 638 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 NUDT9Q9BW91 350 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ROGDIQ9GZN7 287 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ZNF700Q9H0M5 742 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 KLHL31Q9H511 634 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 IPPKQ9H8X2 491 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 ACTR8Q9H981 624 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 LANCL2Q9NS86 450 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 PCDHGA11Q9Y5H2 935 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 BOD1L1Q8NFC6 3051 aa12.64□□□□□ -0.39
CCDC130-202ENST00000540216 MAGEB17A8MXT2 336 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 H0YIV9 168 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 K7EM74 188 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 PSMD12O00232 456 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 SIX3O95343 332 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 TBX6O95947 436 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 PDGFAP04085 211 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 SHBGP04278 402 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 ICAM2P13598 275 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 NR1D1P20393 614 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 HSD17B3P37058 310 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 CASRP41180 1078 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 MTTPP55157 894 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 BTN3A2P78410 334 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 RCN2Q14257 317 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 C10orf62Q5T681 223 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 FAAH2Q6GMR7 532 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 IGFL3Q6UXB1 125 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 CHSY3Q70JA7 882 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 PTRH1Q86Y79 214 aaKnown RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 MYLK4Q86YV6 388 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 L3MBTL4Q8NA19 623 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 TEX19Q8NA77 164 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 PLPP5Q8NEB5 264 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 AENQ8WTP8 325 aaKnown RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 TM9SF4Q92544 642 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 CMTM7Q96FZ5 175 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 MAGEB10Q96LZ2 347 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 QRFPRQ96P65 431 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 SERINC2Q96SA4 455 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 TUBB6Q9BUF5 446 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 C1QTNF3Q9BXJ4 246 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 MS4A8Q9BY19 250 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 AICDAQ9GZX7 198 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 LHPPQ9H008 270 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 COPS7BQ9H9Q2 264 aaPredicted RBP12.63□□□□□ -0.39
CCDC130-202ENST00000540216 ZNF160Q9HCG1 818 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 TBK1Q9UHD2 729 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 DCDC2Q9UHG0 476 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 PCTPQ9UKL6 214 aa12.63□□□□□ -0.39
CCDC130-202ENST00000540216 FASNP49327 2511 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms