RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ERI3O43414 337 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 KLHL41O60662 606 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CSO75390 466 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 B3GALT4O96024 378 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 RAP1GDS1P52306 607 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 PLA2G16P53816 162 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 RAB8AP61006 207 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 RPL38P63173 70 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 OGFOD2Q6N063 350 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TMEM214Q6NUQ4 689 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ABHD17CQ6PCB6 329 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 FNDC5Q8NAU1 212 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ZCCHC10Q8TBK6 192 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 UTP15Q8TED0 518 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 GAL3ST3Q96A11 431 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 NLNQ9BYT8 704 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ENAMQ9NRM1 1142 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 IRAK4Q9NWZ3 460 aa17.99■□□□□ 0.47
TNFRSF1A-213ENST00000540022 FITM1A5D6W6 292 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 EFCAB7A8K855 629 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TXNDC9O14530 226 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ZZEF1O43149 2961 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 OR2B3O76000 313 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 MED26O95402 600 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ALDOCP09972 364 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ZNF888P0CJ79 500 aaPredicted RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SMIM10L1P0DMW3 83 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ITGA1P56199 1179 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 FOXM1Q08050 763 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ACSM2AQ08AH3 577 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SPIN4Q56A73 249 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 PRAMEF17Q5VTA0 474 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ACSM2BQ68CK6 577 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 COMMD6Q7Z4G1 85 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 BMPERQ8N8U9 685 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 RGMAQ96B86 450 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SMIM10Q96HG1 83 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 C17orf62Q9BQA9 187 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CENPKQ9BS16 269 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 C1orf50Q9BV19 199 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 FANCEQ9HB96 536 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SERTAD3Q9UJW9 196 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 G3BP2Q9UN86 482 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CLCA2Q9UQC9 943 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ARL2BPQ9Y2Y0 163 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 POLR3HQ9Y535 204 aaPredicted RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 URADA6NGE7 173 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CCL4P13236 92 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 BSGP35613 385 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 DIO3P55073 304 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ERVK-8P63133 956 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 RAE1P78406 368 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 EMX2Q04743 252 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ST3GAL2Q16842 350 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SMU1Q2TAY7 513 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TRIM40Q6P9F5 258 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TMPRSS7Q7RTY8 843 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 AMER3Q8N944 861 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SRFBP1Q8NEF9 429 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 METTL2AQ96IZ6 378 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 MARK4Q96L34 752 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 FCRL1Q96LA6 429 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 C10orf90Q96M02 699 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 DEPDC7Q96QD5 511 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TEFMQ96QE5 360 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CMKLR1Q99788 373 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 STRADBQ9C0K7 418 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 APMAPQ9HDC9 416 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 PRDM7Q9NQW5 492 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SIRT5Q9NXA8 310 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 AHSPQ9NZD4 102 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 HEY2Q9UBP5 337 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 DLGAP4Q9Y2H0 992 aa17.98■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CELSR3Q9NYQ7 3312 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 HYKKA2RU49 373 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TMX2-CTNND1H3BSU7 103 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 EEDO75530 441 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 GBAP04062 536 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ALOX12P18054 663 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 GRM7Q14831 915 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 IL23RQ5VWK5 629 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 OR4C11Q6IEV9 310 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 NOXRED1Q6NXP6 359 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ZNF793Q6ZN11 406 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 PRSS41Q7RTY9 318 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 GPR135Q8IZ08 494 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CCDC197Q8NCU1 140 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 LIN37Q96GY3 246 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CATSPER2Q96P56 530 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 KCNC2Q96PR1 638 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 EBPLQ9BY08 206 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 RARRES3Q9UL19 164 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TMED5Q9Y3A6 229 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 LOXL2Q9Y4K0 774 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SLC22A7Q9Y694 548 aa17.97■□□□□ 0.47
TNFRSF1A-213ENST00000540022 APC2O95996 2303 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 PMS2P1A4D2B8 440 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 UBDO15205 165 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 KLK1P06870 262 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 IL1RNP18510 177 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms