RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PRDM8Q9NQV8 689 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TMEM74BQ9NUR3 256 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 GID8Q9NWU2 228 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 SIRT5Q9NXA8 310 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TMEM181Q9P2C4 612 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TBC1D29Q9UFV1 150 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 CD300AQ9UGN4 299 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 EIF3LQ9Y262 564 aaKnown RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 DLGAP4Q9Y2H0 992 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 HEBP2Q9Y5Z4 205 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 CFAP20Q9Y6A4 193 aaKnown RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 PIPSLA2A3N6 862 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 FUOMA2VDF0 154 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TMEM247A6NEH6 219 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TRIM64BA6NI03 449 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PDZK1P1A8MUH7 402 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 ANGPT2O15123 496 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 MAGEB3O15480 346 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PRICKLE3O43900 615 aaPredicted RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 SEC22BO75396 215 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 CSF2P04141 144 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 MTHFD1P11586 935 aaKnown RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 BMP2P12643 396 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 JUNDP17535 347 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 DCKP27707 260 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 ACTR1BP42025 376 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 RAB28P51157 221 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 NEK2P51955 445 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 NME5P56597 212 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 KCNK10P57789 538 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 ACTR1AP61163 376 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 KCNC4Q03721 635 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 ILF3Q12906 894 aaKnown RBP eCLIP8.48□□□□□ -1.05
DDB1-213ENST00000539332 RPE65Q16518 533 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 SPATS1Q496A3 300 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 VPS26BQ4G0F5 336 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 SGO1Q5FBB7 561 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PAGE2BQ5JRK9 111 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 CACHD1Q5VU97 1274 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 MED27Q6P2C8 311 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PRMT9Q6P2P2 845 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 DCDC5Q6ZRR9 648 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 CEP68Q76N32 757 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 NRROSQ86YC3 692 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 CLVS1Q8IUQ0 354 aaPredicted RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 RIMKLAQ8IXN7 391 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 LIX1Q8N485 282 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 LINC01555Q8NAE3 123 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 ABHD11Q8NFV4 315 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 OR4K1Q8NGD4 311 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 OR2L8Q8NGY9 312 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 GPBAR1Q8TDU6 330 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TRUB1Q8WWH5 349 aaKnown RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 REPS1Q96D71 796 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PLEKHA8Q96JA3 519 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 TMEM74Q96NL1 305 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 HOPXQ9BPY8 73 aaPredicted RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 PITHD1Q9GZP4 211 aaPredicted RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 OLAHQ9NV23 265 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 VPS29Q9UBQ0 182 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 APOBEC3BQ9UH17 382 aaKnown RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 LEF1Q9UJU2 399 aaPredicted RBP8.48□□□□□ -1.05
DDB1-213ENST00000539332 CROTQ9UKG9 612 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PILRBQ9UKJ0 227 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 PLAGL1Q9UM63 463 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 NEUROG3Q9Y4Z2 214 aa8.48□□□□□ -1.05
DDB1-213ENST00000539332 EP300Q09472 2414 aaPredicted RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 ASXL3Q9C0F0 2248 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 A0A1B0GTW7 788 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 HTR3EA5X5Y0 456 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 OR52A4PA6NMU1 304 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 CFLARO15519 480 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 PRMT3O60678 531 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 EML2O95834 649 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 CTSEP14091 401 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 GNSP15586 552 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 SDC1P18827 310 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 MYF6P23409 242 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 SOX11P35716 441 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 PIK3CBP42338 1070 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 HNRNPFP52597 415 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 CLDN8P56748 225 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 REEP5Q00765 189 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 GK3PQ14409 553 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 SLBPQ14493 270 aaKnown RBP eCLIP8.47□□□□□ -1.05
DDB1-213ENST00000539332 PTGR1Q14914 329 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 TEAD4Q15561 434 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 RGS21Q2M5E4 152 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 SAMD4BQ5PRF9 694 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 CATSPEREQ5SY80 951 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 INTS11Q5TA45 600 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 GALNT18Q6P9A2 607 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 C16orf87Q6PH81 154 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 PRR23BQ6ZRT6 265 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 LMNTD1Q8N9Z9 388 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 VPS37AQ8NEZ2 397 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 HUS1BQ8NHY5 278 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 CHTF18Q8WVB6 975 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms