RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 UPK3BL1B0FP48 263 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 UPK3BL2E5RIL1 263 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ANHXE9PGG2 379 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ATP6V1G1O75348 118 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 CATP04040 527 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ANXA4P09525 319 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 PCGF2P35227 344 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 HPCAL1P37235 193 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 RECQLP46063 649 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 RELAQ04206 551 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 DDX39BQ13838 428 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 E2F2Q14209 437 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 TEAD2Q15562 447 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 HENMT1Q5T8I9 393 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 EGFLAMQ63HQ2 1017 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 GALNT10Q86SR1 603 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 OR2A12Q8NGT7 310 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 OR56A3Q8NH54 315 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 PHF10Q8WUB8 498 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 GLMNQ92990 594 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 CXorf40BQ96DE9 158 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 DOHHQ9BU89 302 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 GABARAPL3Q9BY60 117 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 MROQ9BYG7 248 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 EPS8L2Q9H6S3 715 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SPATA7Q9P0W8 599 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ZNF282Q9UDV7 671 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 VPS4AQ9UN37 437 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 TSPAN11A1L157 253 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 RNASET2O00584 256 aaKnown RBP13.97□□□□□ -0.17
CDCA3-207ENST00000538862 AXIN1O15169 862 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 IDSP22304 550 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 EPHA2P29317 976 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 PNLIPRP1P54315 467 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 FADDQ13158 208 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 CAMK2GQ13555 558 aaPredicted RBP13.97□□□□□ -0.17
CDCA3-207ENST00000538862 SYTL3Q4VX76 610 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 Q6ZVL8 140 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 RAVER1Q8IY67 606 aaKnown RBP13.97□□□□□ -0.17
CDCA3-207ENST00000538862 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 C1orf52Q8N6N3 182 aaKnown RBP13.97□□□□□ -0.17
CDCA3-207ENST00000538862 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 C11orf65Q8NCR3 313 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 CDC26Q8NHZ8 85 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 BTN2A2Q8WVV5 523 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 TPD52L3Q96J77 140 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 VPS35Q96QK1 796 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 HEPHQ9BQS7 1158 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 SIRT5Q9NXA8 310 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 AASSQ9UDR5 926 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 DUSP12Q9UNI6 340 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 TMEM98Q9Y2Y6 226 aa13.97□□□□□ -0.17
CDCA3-207ENST00000538862 HELZP42694 1942 aaKnown RBP13.97□□□□□ -0.17
CDCA3-207ENST00000538862 SLC5A10A0PJK1 596 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 OR2AG2A6NM03 316 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 CLDN24A6NM45 220 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 ZNF197O14709 1029 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 WBP4O75554 376 aaKnown RBP13.96□□□□□ -0.17
CDCA3-207ENST00000538862 ETHE1O95571 254 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 COL9A1P20849 921 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 PSMB9P28065 219 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 KRT20P35900 424 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 PXNP49023 591 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-207ENST00000538862 CRYBA2P53672 197 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 EPHA5P54756 1037 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 SELENOWP63302 87 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 ELOAQ14241 798 aaKnown RBP13.96□□□□□ -0.17
CDCA3-207ENST00000538862 OXA1LQ15070 435 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 HKDC1Q2TB90 917 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 TRIM16LQ309B1 348 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 UBE2UQ5VVX9 321 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 MLIPQ5VWP3 458 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 CCDC81Q6ZN84 652 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 CCDC71Q8IV32 467 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-207ENST00000538862 OR7G3Q8NG95 312 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 DYNC2LI1Q8TCX1 351 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 FCGR1BQ92637 280 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 REPS1Q96D71 796 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 MED8Q96G25 268 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 OR4K3Q96R72 315 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 RIOK2Q9BVS4 552 aaKnown RBP13.96□□□□□ -0.17
CDCA3-207ENST00000538862 PLA2G2FQ9BZM2 168 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 ANKHQ9HCJ1 492 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 GIN1Q9NXP7 522 aa13.96□□□□□ -0.17
CDCA3-207ENST00000538862 OR2A25A4D2G3 310 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM202A6NGA9 273 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 FADS2P1A8MWK0 482 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 ADAMDEC1O15204 470 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 PCDHGA12O60330 932 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 MAN1A2O60476 641 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 ATG13O75143 517 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 NADKO95544 446 aaPredicted RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 FADS2O95864 444 aaKnown RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 NUDT7P0C024 238 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 CDH3P22223 829 aa13.96□□□□□ -0.18
CDCA3-207ENST00000538862 PTX3P26022 381 aaPredicted RBP13.96□□□□□ -0.18
CDCA3-207ENST00000538862 TIA1P31483 386 aaKnown RBP eCLIP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms