RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 GRHL2Q6ISB3 625 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 NIPAL1Q6NVV3 410 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 METTL2BQ6P1Q9 378 aaKnown RBP12.49□□□□□ -0.41
COPS7A-207ENST00000538375 TRIM40Q6P9F5 258 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 CHSY3Q70JA7 882 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 MED25Q71SY5 747 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 VN1R5Q7Z5H4 357 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 PPP1R32Q7Z5V6 425 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 MRGPREQ86SM8 312 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 RIBC1Q8N443 379 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-207ENST00000538375 MREGQ8N565 214 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 OR7G3Q8NG95 312 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 REPS1Q96D71 796 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 MS4A6EQ96DS6 147 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 SEC16BQ96JE7 1060 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 VPS50Q96JG6 964 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 FER1L6-AS2Q96M78 137 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
COPS7A-207ENST00000538375 RBCK1Q9BYM8 510 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 TRIM55Q9BYV6 548 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 REXO4Q9GZR2 422 aaKnown RBP12.49□□□□□ -0.41
COPS7A-207ENST00000538375 IQCGQ9H095 443 aaKnown RBP12.49□□□□□ -0.41
COPS7A-207ENST00000538375 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-207ENST00000538375 C14orf105Q9NVL8 296 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 COPG2Q9UBF2 871 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 PCDHGA11Q9Y5H2 935 aa12.49□□□□□ -0.41
COPS7A-207ENST00000538375 A0A088AWK7 358 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 IDSB3KWA1 339 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 MKRN2OSH3BPM6 223 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 MASP2O00187 686 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 PSMD12O00232 456 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 B4GALT2O60909 372 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ERLIN1O75477 346 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 CDC123O75794 336 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 BMP10O95393 424 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 IMPDH1P20839 514 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ZNF10P21506 573 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 CRHR1P34998 444 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 HERVK_113P63132 956 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 PHEXP78562 749 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 CCDC153Q494R4 210 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 SGO1Q5FBB7 561 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 SH2D5Q6ZV89 423 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 SLC22A9Q8IVM8 553 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ZC3H7AQ8IWR0 971 aaKnown RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 SRRM1Q8IYB3 904 aaKnown RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 LAS2Q8IYD9 372 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 SHISA5Q8N114 240 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ZNF843Q8N446 348 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 CCNYL1Q8N7R7 359 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 TMEM102Q8N9M5 508 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 OR52B6Q8NGF0 335 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 TRPC4APQ8TEL6 797 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ZNF473Q8WTR7 871 aaKnown RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 GAL3ST3Q96A11 431 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 C8orf44Q96CB5 159 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 CMTM7Q96FZ5 175 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ERVK-6Q9BXR3 956 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 TGIF2Q9GZN2 237 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ADNPQ9H2P0 1102 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 OR51B5Q9H339 312 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 C12orf65Q9H3J6 166 aaKnown RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ATP13A2Q9NQ11 1180 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ZNF71Q9NQZ8 489 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-207ENST00000538375 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 HS3ST3B1Q9Y662 390 aa12.48□□□□□ -0.41
COPS7A-207ENST00000538375 OR2W5A6NFC9 320 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 AGPSO00116 658 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 SAP18O00422 153 aaKnown RBP12.47□□□□□ -0.41
COPS7A-207ENST00000538375 B3GALT2O43825 422 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 UGDHO60701 494 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 ALOX12BO75342 701 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 SPAG7O75391 227 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 OTCP00480 354 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 SMIM10L1P0DMW3 83 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 CPA3P15088 417 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 ACPPP15309 386 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 SERPINB1P30740 379 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 NEK2P51955 445 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 RAP1GDS1P52306 607 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 PRKAA2P54646 552 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 CLCQ05315 142 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 PCDH1Q08174 1060 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 RAPSNQ13702 412 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 AP5B1Q2VPB7 878 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 TUBB8Q3ZCM7 444 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 UNC50Q53HI1 259 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 KIRREL2Q6UWL6 708 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 APLFQ8IW19 511 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-207ENST00000538375 PARP9Q8IXQ6 854 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 RNF175Q8N4F7 328 aa12.47□□□□□ -0.41
COPS7A-207ENST00000538375 CLEC1AQ8NC01 280 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms