RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 CSNK1DP48730 415 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ANXA11P50995 505 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RPS6KA3P51812 740 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PGDP52209 483 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF134P52741 427 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MFAP4P55083 255 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LOXL3P58215 753 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PFN3P60673 137 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 DYNLT1P63172 113 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TPM4P67936 248 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 IL9RQ01113 521 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 IL10RBQ08334 325 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PPIDQ08752 370 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CAMK2DQ13557 499 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ALKBH1Q13686 389 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RCN2Q14257 317 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FZD2Q14332 565 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KRT81Q14533 505 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PTPRCAPQ14761 206 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LASP1Q14847 261 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CLCA4Q14CN2 919 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MED22Q15528 200 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 UGP2Q16851 508 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ALG11Q2TAA5 492 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GALNTL6Q49A17 601 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TMEM52BQ4KMG9 183 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LRRC23Q53EV4 343 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF805Q5CZA5 627 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF766Q5HY98 468 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SPDYCQ5MJ68 293 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CERCAMQ5T4B2 595 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 N4BP2L1Q5TBK1 243 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LYSMD4Q5XG99 296 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 DENND2CQ68D51 928 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KIAA0895LQ68EN5 471 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TMEM88Q6PEY1 159 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GDPD4Q6W3E5 623 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GCNT7Q6ZNI0 430 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LINC00696Q6ZRV3 163 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF551Q7Z340 670 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SPATA21Q7Z572 469 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HSD11B1LQ7Z5J1 315 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TECPR1Q7Z6L1 1165 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ABI3BPQ7Z7G0 1075 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MRGPRGQ86SM5 289 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 VPS36Q86VN1 386 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HORMAD1Q86X24 394 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 P3H2Q8IVL5 708 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KLHL7Q8IXQ5 586 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC15A3Q8IY34 581 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KATNAL2Q8IYT4 538 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF567Q8N184 647 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PCDH20Q8N6Y1 951 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OR2AP1Q8NGE2 309 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OR2T34Q8NGX1 318 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GANCQ8TET4 914 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM216AQ8WUB2 273 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NAT14Q8WUY8 206 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KCNE4Q8WWG9 221 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OR8D1Q8WZ84 308 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 INTS12Q96CB8 462 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HAUS1Q96CS2 278 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF764Q96H86 408 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HES6Q96HZ4 224 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LRIG1Q96JA1 1093 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MS4A14Q96JA4 679 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 AGAP3Q96P47 875 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NR1H4Q96RI1 486 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 AGAP2Q99490 1192 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OMDQ99983 421 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SEMA3CQ99985 751 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MGME1Q9BQP7 344 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF670Q9BS34 389 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 H2AFJQ9BTM1 129 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TUBB6Q9BUF5 446 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 WRAP53Q9BUR4 548 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC25A23Q9BV35 468 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MLPHQ9BV36 600 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NPLQ9BXD5 320 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CALN1Q9BXU9 219 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC17A9Q9BYT1 436 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CLPBQ9H078 707 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZDHHC6Q9H6R6 413 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CATSPERBQ9H7T0 1116 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PLEKHA2Q9HB19 425 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SGK2Q9HBY8 427 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NT5MQ9NPB1 228 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RBM22Q9NW64 420 aaKnown RBP eCLIP2.49□□□□□ -2.011e-6■■■□□ 18.3
TNFRSF1A-210ENST00000537842 ZNHIT6Q9NWK9 470 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 COQ3Q9NZJ6 369 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 AKAP7Q9P0M2 348 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RCOR3Q9P2K3 495 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 EXTL2Q9UBQ6 330 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC25A10Q9UBX3 287 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 IL36AQ9UHA7 158 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 IL19Q9UHD0 177 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SERTAD3Q9UJW9 196 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OSGIN1Q9UJX0 560 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PPIL1Q9Y3C6 166 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PCDHGA5Q9Y5G8 931 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms