RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 LRRC37BQ96QE4 947 aa14.89□□□□□ -0.03
SFSWAP-206ENST00000537582 PRDM7Q9NQW5 492 aa14.89□□□□□ -0.03
SFSWAP-206ENST00000537582 IRAK4Q9NWZ3 460 aa14.89□□□□□ -0.03
SFSWAP-206ENST00000537582 OCIAD1Q9NX40 245 aa14.89□□□□□ -0.03
SFSWAP-206ENST00000537582 NOP53Q9NZM5 478 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-206ENST00000537582 TRIM33Q9UPN9 1127 aa14.89□□□□□ -0.03
SFSWAP-206ENST00000537582 ZNF860A6NHJ4 632 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 TMPRSS11DO60235 418 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 DCTN3O75935 186 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 SEMA3DO95025 777 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 IL1RNP18510 177 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 GPX3P22352 226 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 CERS1P27544 350 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 TIA1P31483 386 aaKnown RBP eCLIP14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 UFM1P61960 85 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 BTN3A2P78410 334 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 DEFB134Q4QY38 66 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 TMEM35AQ53FP2 167 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 SPIN4Q56A73 249 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 PDSS2Q86YH6 399 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 MMP21Q8N119 569 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 CPSF7Q8N684 471 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 KRTCAP2Q8N6L1 136 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 ZNF655Q8N720 491 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 CDC26Q8NHZ8 85 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 RGMAQ96B86 450 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 ZNF501Q96CX3 271 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 C10orf90Q96M02 699 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 DPYSL5Q9BPU6 564 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 FGF21Q9NSA1 209 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 NMRK1Q9NWW6 199 aa14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 SIDT1Q9NXL6 827 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-206ENST00000537582 PMS2P1A4D2B8 440 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 ANKRD28O15084 1053 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 GFRA3O60609 400 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 SRPX2O60687 465 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 CCDC22O60826 627 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 LRATO95237 230 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 ANXA4P09525 319 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 SMIM10L1P0DMW3 83 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 IL12AP29459 219 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 SSR2P43308 183 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 LIMK1P53667 647 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 CORO7P57737 925 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 STXBP1P61764 594 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 KLF10Q13118 480 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 CLPPQ16740 277 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 OR4C11Q6IEV9 310 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 C6orf89Q6UWU4 347 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 RBM44Q6ZP01 1051 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 TRPM8Q7Z2W7 1104 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 N4BP2L2Q92802 583 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 GFM2Q969S9 779 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 GAL3ST3Q96A11 431 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 SMIM10Q96HG1 83 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 QRFPRQ96P65 431 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 BRINP2Q9C0B6 783 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 APMAPQ9HDC9 416 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 SDR39U1Q9NRG7 319 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 ASIC5Q9NY37 505 aa14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 EIF3LQ9Y262 564 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-206ENST00000537582 A0A0A6YYD5 115 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 GNG14A0A1W2PPG7 69 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 TM4SF5O14894 197 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 MAP3K7O43318 606 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 OR2B3O76000 313 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 TIAF1O95411 115 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 CCL4P13236 92 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 IDO1P14902 403 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 ATP5A1P25705 553 aaKnown RBP14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 OLR1P78380 273 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 FOXM1Q08050 763 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 SQLEQ14534 574 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 SMU1Q2TAY7 513 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 CCNYL2Q5T2Q4 361 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 TMTC4Q5T4D3 741 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 GALNT18Q6P9A2 607 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 TRIM40Q6P9F5 258 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 GK5Q6ZS86 529 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 GLRX5Q86SX6 157 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 MIER2Q8N344 545 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 METTL27Q8N6F8 245 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 ACOT4Q8N9L9 421 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 UCN3Q969E3 161 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 KCNC2Q96PR1 638 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 OR6C1Q96RD1 312 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 TMED5Q9Y3A6 229 aa14.86□□□□□ -0.03
SFSWAP-206ENST00000537582 HYKKA2RU49 373 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CCT8L1PA6NM43 557 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 EFCAB7A8K855 629 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CAPN14A8MX76 684 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 ZSCAN9O15535 394 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 AKAP10O43572 662 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PRKRAO75569 313 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 ALOX12P18054 663 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 HIST1H1TP22492 207 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PIK3R1P27986 724 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms