RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CLCA1A8K7I4 914 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 H3BM21 787 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 C1orf105O95561 183 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 TGFB1P01137 390 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 CDK1P06493 297 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 ALOX5P09917 674 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 ANXA8P13928 327 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 POLR2EP19388 210 aaKnown RBP13.74□□□□□ -0.21
USP44-203ENST00000537435 PXNP49023 591 aaPredicted RBP13.74□□□□□ -0.21
USP44-203ENST00000537435 MAPK11Q15759 364 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 LY6G5CQ5SRR4 150 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 MLIPQ5VWP3 458 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 LILRA6Q6PI73 481 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 DPPA4Q7L190 304 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP44-203ENST00000537435 DACH2Q96NX9 599 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 OR51B5Q9H339 312 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 SPHK2Q9NRA0 654 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 INIPQ9NRY2 104 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 SPASTQ9UBP0 616 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 IL36AQ9UHA7 158 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 POFUT2Q9Y2G5 429 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 TSPAN11A1L157 253 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 J3KTA2 159 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 GADD45AP24522 165 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 PRIM2P49643 509 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 PNLIPRP1P54315 467 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 RPS3AP61247 264 aaKnown RBP13.73□□□□□ -0.21
USP44-203ENST00000537435 FCHO2Q0JRZ9 810 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 DMC1Q14565 340 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 STARD3Q14849 445 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 MICAQ29983 383 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 MPEG1Q2M385 716 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 IER5LQ5T953 404 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 LIPIQ6XZB0 460 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 SLC39A5Q6ZMH5 540 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 PLEKHG7Q6ZR37 379 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 CADM3Q8N126 398 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 OR9Q2Q8NGE9 314 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 OR5AK3PQ8NH89 298 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 UTP15Q8TED0 518 aaKnown RBP13.73□□□□□ -0.21
USP44-203ENST00000537435 PPCDCQ96CD2 204 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ITPKCQ96DU7 683 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 MRGPRX3Q96LB0 322 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 TMEM121BQ9BXQ6 578 aaPredicted RBP13.73□□□□□ -0.21
USP44-203ENST00000537435 CFHR5Q9BXR6 569 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ZNF226Q9NYT6 803 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 GULP1Q9UBP9 304 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 MAP4K5Q9Y4K4 846 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 FGF18O76093 207 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 FURINP09958 794 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 NPPBP16860 134 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 UGT2B10P36537 528 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 CTSKP43235 329 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 PPP5CP53041 499 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 RBBP4Q09028 425 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 C2orf80Q0P641 193 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 GRIN2CQ14957 1233 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 TEAD2Q15562 447 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 INAVAQ3KP66 663 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ZNF404Q494X3 552 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ZNF805Q5CZA5 627 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 ZNF366Q8N895 744 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 PSMA8Q8TAA3 256 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 TRIM39Q9HCM9 518 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 DMRT3Q9NQL9 472 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 POLE4Q9NR33 117 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 FKBP14Q9NWM8 211 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 GIN1Q9NXP7 522 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 GPR83Q9NYM4 423 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 DYRK1BQ9Y463 629 aa13.73□□□□□ -0.21
USP44-203ENST00000537435 PLXNA2O75051 1894 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 FOXE1O00358 373 aaPredicted RBP13.72□□□□□ -0.21
USP44-203ENST00000537435 GPR37L1O60883 481 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 STSP08842 583 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PTX3P26022 381 aaPredicted RBP13.72□□□□□ -0.21
USP44-203ENST00000537435 CD40LGP29965 261 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 NNMTP40261 264 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 MAPK9P45984 424 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 TUBA1BP68363 451 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 CDK6Q00534 326 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 MEF2AQ02078 507 aaPredicted RBP13.72□□□□□ -0.21
USP44-203ENST00000537435 TUBA1AQ71U36 451 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 ZNF605Q86T29 641 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 RNF130Q86XS8 419 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP44-203ENST00000537435 CFAP206Q8IYR0 622 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 KIAA1958Q8N8K9 716 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 ZNF675Q8TD23 568 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 C16orf78Q8WTQ4 265 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 ANKHQ9HCJ1 492 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 THSD1Q9NS62 852 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PIPSLA2A3N6 862 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 METTL15A6NJ78 407 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 C1GALT1C1LP0DN25 315 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms