RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 CHTF18Q8WVB6 975 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 THOC1Q96FV9 657 aaKnown RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 APIPQ96GX9 242 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 KCNC2Q96PR1 638 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 C17orf62Q9BQA9 187 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 ZPBPQ9BS86 351 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 ZNF717Q9BY31 904 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 LHX9Q9NQ69 397 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 PRDM7Q9NQW5 492 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 RIC8BQ9NVN3 520 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 SRPK3Q9UPE1 567 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 PCDHGA3Q9Y5H0 932 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 TROVE2P10155 538 aaKnown RBP eCLIP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 RAP1GDS1P52306 607 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 AQP5P55064 265 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 TGM3Q08188 693 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 HERC3Q15034 1050 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 KIAA0040Q15053 153 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 SLC9B1Q4ZJI4 515 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 RHBDD2Q6NTF9 364 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 TUBGCP3Q96CW5 907 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 RNF31Q96EP0 1072 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 C11orf24Q96F05 449 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 METTL2AQ96IZ6 378 aaKnown RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 TEFMQ96QE5 360 aaKnown RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 SIKE1Q9BRV8 207 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 TBCDQ9BTW9 1192 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 ASPSCR1Q9BZE9 553 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 WDR55Q9H6Y2 383 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 POLR1BQ9H9Y6 1135 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 KCNK13Q9HB14 408 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 LRTM1Q9HBL6 345 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 AHSPQ9NZD4 102 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 SPTBN2O15020 2390 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 SRRM3A6NNA2 597 aaPredicted RBP23.02■■□□□ 1.28
HMGA2-207ENST00000537275 RTCAO00442 366 aaKnown RBP23.02■■□□□ 1.28
HMGA2-207ENST00000537275 FOXS1O43638 330 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 TNFSF15O95150 251 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 PRR35P0CG20 571 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 DRD4P21917 467 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 EPHA3P29320 983 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 BSGP35613 385 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 TSFMP43897 325 aaKnown RBP23.02■■□□□ 1.28
HMGA2-207ENST00000537275 GABREP78334 506 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 AP5B1Q2VPB7 878 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 TMEM164Q5U3C3 297 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 OR4C11Q6IEV9 310 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 TTLL10Q6ZVT0 673 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 LARP4Q71RC2 724 aaKnown RBP eCLIP23.02■■□□□ 1.28
HMGA2-207ENST00000537275 PRSS41Q7RTY9 318 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 SLC38A9Q8NBW4 561 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 MVB12AQ96EY5 273 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 PPP3R2Q96LZ3 170 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 QRFPRQ96P65 431 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 AKTIPQ9H8T0 292 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 ACTR5Q9H9F9 607 aaPredicted RBP23.02■■□□□ 1.28
HMGA2-207ENST00000537275 C1orf109Q9NX04 203 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 DHCR7Q9UBM7 475 aaKnown RBP23.02■■□□□ 1.28
HMGA2-207ENST00000537275 DCTN4Q9UJW0 460 aa23.02■■□□□ 1.28
HMGA2-207ENST00000537275 A0A0G2JN53 185 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 C9orf172C9J069 976 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 DIAPH2O60879 1101 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 PEX11AO75192 247 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 VPS4BO75351 444 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 B3GALT4O96024 378 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 IL1RNP18510 177 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 IDH3AP50213 366 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 CAMK2BQ13554 666 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 DEFB134Q4QY38 66 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 ATP6AP1LQ52LC2 224 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 RFTN2Q52LD8 501 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-207ENST00000537275 SPIN4Q56A73 249 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 C6orf136Q5SQH8 315 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 PDSS2Q86YH6 399 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 DTWD1Q8N5C7 304 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 C1orf52Q8N6N3 182 aaKnown RBP23.01■■□□□ 1.27
HMGA2-207ENST00000537275 EBF4Q9BQW3 602 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 SORBS1Q9BX66 1292 aaKnown RBP23.01■■□□□ 1.27
HMGA2-207ENST00000537275 B3GNT4Q9C0J1 378 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 EPN3Q9H201 632 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 SIRT5Q9NXA8 310 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 GIMAP2Q9UG22 337 aa23.01■■□□□ 1.27
HMGA2-207ENST00000537275 DSCR3O14972 297 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 GALR3O60755 368 aaPredicted RBP23■■□□□ 1.27
HMGA2-207ENST00000537275 SEC22BO75396 215 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 NTRK1P04629 796 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 HBQ1P09105 142 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 ZNF28P17035 718 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 BTN3A2P78410 334 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 ACSM2AQ08AH3 577 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 GALNTL6Q49A17 601 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 ACSM2BQ68CK6 577 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 ZNF793Q6ZN11 406 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 COMMD6Q7Z4G1 85 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 ZFAND4Q86XD8 727 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 STON2Q8WXE9 905 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 NSRP1Q9H0G5 558 aaKnown RBP23■■□□□ 1.27
HMGA2-207ENST00000537275 DDX31Q9H8H2 851 aaKnown RBP23■■□□□ 1.27
HMGA2-207ENST00000537275 ANKHQ9HCJ1 492 aa23■■□□□ 1.27
HMGA2-207ENST00000537275 KLK13Q9UKR3 277 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms