RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 LRRN3Q9H3W5 708 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 NLGN3Q9NZ94 848 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 C19orf25Q9UFG5 118 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 GNG8Q9UK08 70 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 RNF6Q9Y252 685 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 FARS2O95363 451 aaKnown RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 HSD3B1P14060 373 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 DGKQP52824 942 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 RHDQ02161 417 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 GLT8D1Q68CQ7 371 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 KLHDC10Q6PID8 442 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 MOB2Q70IA6 237 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF717Q9BY31 904 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 OSBPL2Q9H1P3 480 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 HCN4Q9Y3Q4 1203 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PCDHB14Q9Y5E9 798 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PRSS51A0A1B0GVH4 220 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 JUNP05412 331 aaKnown RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ACADVLP49748 655 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SLC18A1P54219 525 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 RPS24P62847 133 aaKnown RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PLP2Q04941 152 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 MEDAGQ5VYS4 303 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 FAM46DQ8NEK8 389 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PHOSPHO1Q8TCT1 267 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 AURKBQ96GD4 344 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 GALPQ9UBC7 116 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 GRHPRQ9UBQ7 328 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 KCNN3Q9UGI6 736 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 TAC3Q9UHF0 121 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 MGAT4BQ9UQ53 548 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SLC22A14Q9Y267 594 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PCDHB11Q9Y5F2 797 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 A0A1W2PP18 115 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 CREG1O75629 220 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 CH25HO95992 272 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 MCCD1P59942 119 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SLC10A6Q3KNW5 377 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 MBLAC2Q68D91 279 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 HAGHLQ6PII5 290 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SLC36A4Q6YBV0 504 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PLEKHG7Q6ZR37 379 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 CPED1A4D0V7 1026 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 INMT-MINDY4F8WBC2 141 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 CREB1P16220 341 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 S100PP25815 95 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 IRF9Q00978 393 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 TRAM2Q15035 370 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF829Q3KNS6 432 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 KIAA1614Q5VZ46 1190 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 TMIGD1Q6UXZ0 262 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ERMP1Q7Z2K6 904 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 RASGRP3Q8IV61 690 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 OR2AP1Q8NGE2 309 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 NFKBIDQ8NI38 313 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 NSMAFQ92636 917 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 TFGQ92734 400 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 METTL7AQ9H8H3 244 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF358Q9NW07 568 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 WDR37Q9Y2I8 494 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 CMAHPQ9Y471 501 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 NOTOA8MTQ0 251 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 VILLO15195 856 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 POP7O75817 140 aaKnown RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 NPPAP01160 153 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 PDYNP01213 254 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 TNFP01375 233 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF30P17039 623 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 RPL17P18621 184 aaKnown RBP10.3□□□□□ -0.76
CLIP1-209ENST00000537178 GRIA2P42262 883 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 CDH15P55291 814 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 LRRC73Q5JTD7 316 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 GPAT4Q86UL3 456 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 NPAS3Q8IXF0 933 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 ERVK-18Q9QC07 812 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 IL36AQ9UHA7 158 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 LAMP5Q9UJQ1 280 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 WDR45Q9Y484 360 aa10.3□□□□□ -0.76
CLIP1-209ENST00000537178 OR51F1A6NGY5 319 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 B4DGG1 531 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 MANBAO00462 879 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 HRGP04196 525 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 CFIP05156 583 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 LMO2P25791 158 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 EIF1AXP47813 144 aaKnown RBP10.29□□□□□ -0.76
CLIP1-209ENST00000537178 DGKEP52429 567 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 NRLP54845 237 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 KCNC4Q03721 635 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 CHRNA6Q15825 494 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 HSD17B12Q53GQ0 312 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 LRIF1Q5T3J3 769 aa10.29□□□□□ -0.76
CLIP1-209ENST00000537178 THOC6Q86W42 341 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms