RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 JPH3Q8WXH2 748 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-208ENST00000537004 PMEPA1Q969W9 287 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 MED8Q96G25 268 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 PKP4Q99569 1192 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 STRADBQ9C0K7 418 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 THSD1Q9NS62 852 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 INTS7Q9NVH2 962 aaKnown RBP11.44□□□□□ -0.58
CLIP1-208ENST00000537004 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 CMTM6Q9NX76 183 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 ASIC5Q9NY37 505 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 C6orf203Q9P0P8 240 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-208ENST00000537004 GMPR2Q9P2T1 348 aaKnown RBP11.44□□□□□ -0.58
CLIP1-208ENST00000537004 KLHL3Q9UH77 587 aa11.44□□□□□ -0.58
CLIP1-208ENST00000537004 CDRT15L2A8MXV6 281 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 DNAJA2O60884 412 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 RSL1D1O76021 490 aaKnown RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 JMJD7P0C870 316 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 VARSP26640 1264 aaKnown RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 YBX1P67809 324 aaKnown RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 NAE1Q13564 534 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 TRIP10Q15642 601 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 LPCAT4Q643R3 524 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 ABRAXAS1Q6UWZ7 409 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 TRIM48Q8IWZ4 208 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 PQLC1Q8N2U9 271 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 LIX1Q8N485 282 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 OR10G6Q8NH81 332 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 DNAJB14Q8TBM8 379 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 NUDT8Q8WV74 236 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 TMEM125Q96AQ2 219 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 LINC00615Q96LM1 132 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 MAGEB10Q96LZ2 347 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 ZNF578Q96N58 590 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 TRIM8Q9BZR9 551 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 PCDHA9Q9Y5H5 950 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 C17orf113A0A1B0GUU1 675 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 OR5K4A6NMS3 321 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 IFRD1O00458 451 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 CASQ2O14958 399 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 UGDHO60701 494 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 C1orf105O95561 183 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 NPPAP01160 153 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 VIPP01282 170 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 C8BP07358 591 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 HSD17B1P14061 328 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 PEX2P28328 305 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 IMPA1P29218 277 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 SLC5A2P31639 672 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 DGKQP52824 942 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 MAPK10P53779 464 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 GPLD1P80108 840 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 IRF8Q02556 426 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 SPATS1Q496A3 300 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 LIPJQ5W064 366 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 FRG2Q64ET8 278 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 DUS1LQ6P1R4 473 aaKnown RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 CYP2R1Q6VVX0 501 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 TMEM26Q6ZUK4 368 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 DHFR2Q86XF0 187 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 SPACA3Q8IXA5 215 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 KLHDC8AQ8IYD2 350 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 DPP10Q8N608 796 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 FBXO15Q8NCQ5 510 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-208ENST00000537004 OR4D9Q8NGE8 314 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 FRG2BQ96QU4 278 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 ZBTB18Q99592 522 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 CMKLR1Q99788 373 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 ECSITQ9BQ95 431 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 VCX3BQ9H321 246 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 SLC24A3Q9HC58 644 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 SLAMF8Q9P0V8 285 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
CLIP1-208ENST00000537004 PRSS51A0A1B0GVH4 220 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 E7EQ34 232 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 RRP8O43159 456 aaKnown RBP11.42□□□□□ -0.58
CLIP1-208ENST00000537004 DUX1O43812 170 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 STAMBPO95630 424 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 BCKDHAP12694 445 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 CD22P20273 847 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 PRPH2P23942 346 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 GFERP55789 205 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 PCBP4P57723 403 aaKnown RBP11.42□□□□□ -0.58
CLIP1-208ENST00000537004 RHDQ02161 417 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 PLOD1Q02809 727 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-208ENST00000537004 GPR18Q14330 331 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 KIAA0040Q15053 153 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 TGIF1Q15583 401 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 XKR6Q5GH73 641 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 RABL3Q5HYI8 236 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 METRNLQ641Q3 311 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 TMEM71Q6P5X7 295 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 SUSD1Q6UWL2 747 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 OR2L2Q8NH16 312 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 OR56A3Q8NH54 315 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 HM13Q8TCT9 377 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 CXorf40BQ96DE9 158 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 OR4K3Q96R72 315 aa11.42□□□□□ -0.58
CLIP1-208ENST00000537004 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms