RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ADORA2A-AS1P86434 159 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 REEP5Q00765 189 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MAPKAPK3Q16644 382 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 HP1BP3Q5SSJ5 553 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SBSNQ6UWP8 590 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 Q6ZPB1 254 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 THOC6Q86W42 341 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 KIF2BQ8N4N8 673 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TRPV3Q8NET8 790 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 AIF1LQ9BQI0 150 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CHMP2BQ9UQN3 213 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PSMD12O00232 456 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ASNA1O43681 348 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SLC25A12O75746 678 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 COX6B1P14854 86 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 IVDP26440 423 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TPP2P29144 1249 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 HNF4AP41235 474 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CYB561P49447 251 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 RAB8AP61006 207 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MORF4L2Q15014 288 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ZNF468Q5VIY5 522 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TRMT10BQ6PF06 316 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 GDF7Q7Z4P5 450 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ANKRD53Q8N9V6 530 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SLC6A16Q9GZN6 736 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 KCNF1Q9H3M0 494 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 IKZF3Q9UKT9 509 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SLC22A14Q9Y267 594 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 KCNE2Q9Y6J6 123 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 C2CD3Q4AC94 2353 aa18.44■□□□□ 0.54
TNFRSF1B-204ENST00000536782 HIVEP1P15822 2718 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SAGE2PA6NJ88 616 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SNRPB2P08579 225 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 RNH1P13489 461 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ZNF37AP17032 561 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 POU3F2P20265 443 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MAOAP21397 527 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 RBBP5Q15291 538 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PPP1R3AQ16821 1122 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 STEAP4Q687X5 459 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NXPE4Q6UWF7 544 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TMPRSS11BQ86T26 416 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SIAH3Q8IW03 269 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 GHDCQ8N2G8 530 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ARMC2Q8NEN0 867 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ADAMTS18Q8TE60 1221 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 LRRC39Q96DD0 335 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PWWP2AQ96N64 755 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PRDM9Q9NQV7 894 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MEMO1Q9Y316 297 aa18.43■□□□□ 0.54
TNFRSF1B-204ENST00000536782 IGKV3D-11A0A0A0MRZ8 115 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TCRBV16S1A1N1A0A5B0 115 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CTAGE15A4D2H0 777 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CDC7O00311 574 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NME2P1O60361 137 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SERPINA6P08185 405 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SMIM10L1P0DMW3 83 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ABOP16442 354 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ZNF24P17028 368 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SAT1P21673 171 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NME2P22392 152 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MLF1P58340 268 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 HYAL2Q12891 473 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CTAGE6Q86UF2 777 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NKAPQ8N5F7 415 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ANKRD7Q92527 254 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TMEM125Q96AQ2 219 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SMIM10Q96HG1 83 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 EGFL8Q99944 293 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TRIM51Q9BSJ1 452 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 RHBGQ9H310 441 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 KLHL31Q9H511 634 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TRIM45Q9H8W5 580 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 GPAMQ9HCL2 828 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ZFATQ9P243 1243 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TEX264Q9Y6I9 313 aa18.42■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NPEPPSL1A6NEC2 478 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 FCHO1O14526 889 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TCP1P17987 556 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TRHRP34981 398 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 HLCSP50747 726 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CDKL1Q00532 357 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 FRG1Q14331 258 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 TOR1AIP1Q5JTV8 583 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SYDE1Q6ZW31 735 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CA13Q8N1Q1 262 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CPSF7Q8N684 471 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NFAM1Q8NET5 270 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CREB3L4Q8TEY5 395 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PHF12Q96QT6 1004 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 WDR83Q9BRX9 315 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 DEFB126Q9BYW3 111 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 NECTIN3Q9NQS3 549 aa18.41■□□□□ 0.54
TNFRSF1B-204ENST00000536782 A8MUA0 341 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 CLDN14O95500 239 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 HNMTP50135 292 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ITGA8P53708 1063 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ARL4CP56559 192 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms