RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 COPEO14579 308 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TAPBPO15533 448 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 RDH16O75452 317 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 WDR47O94967 919 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 S100BP04271 92 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AHRP35869 848 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 XCR1P46094 333 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 EEF1A2Q05639 463 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SLC18A2Q05940 514 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PWP1Q13610 501 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PLEKHN1Q494U1 663 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PRR30Q53SZ7 412 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TECRLQ5HYJ1 363 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 IGFL2Q6UWQ7 119 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NDUFAF7Q7L592 441 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ATOH8Q96SQ7 321 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 MRPL57Q9BQC6 102 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AIF1LQ9BQI0 150 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TMEM79Q9BSE2 394 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 VN1R1Q9GZP7 353 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 IQCGQ9H095 443 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SLAMF7Q9NQ25 335 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CD274Q9NZQ7 290 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 XPR1Q9UBH6 696 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NAALAD2Q9Y3Q0 740 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CSAG2Q9Y5P2 127 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 USP9XQ93008 2570 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NSG1A0A0A6YYJ2 146 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SUPT3HB4E1H0 165 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SUPT3HO75486 399 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 KLHL18O94889 574 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CXCR2P25025 360 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 VARSP26640 1264 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CRHR1P34998 444 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CDKL4Q5MAI5 379 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AGAP7PQ5VUJ5 663 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TCAIMQ8N3R3 496 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TBC1D19Q8N5T2 526 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AMER2Q8N7J2 671 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NT5CQ8TCD5 201 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AGAP4Q96P64 663 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 MRPL46Q9H2W6 279 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NUDT4Q9NZJ9 180 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 GRID1Q9ULK0 1009 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 B3GNT3Q9Y2A9 372 aa16.87■□□□□ 0.29
TNFRSF1A-209ENST00000536717 OR2W5A6NFC9 320 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ZNF860A6NHJ4 632 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PCDH17O14917 1159 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 GALR3O60755 368 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 B3GALT4O96024 378 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SERPIND1P05546 499 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 GGT5P36269 586 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 KCNC1P48547 511 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 HYAL2Q12891 473 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 HERC3Q15034 1050 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PCOLCEQ15113 449 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 INPP5JQ15735 1006 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 FBXO48Q5FWF7 155 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 IRAK1BP1Q5VVH5 260 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SLCO4C1Q6ZQN7 724 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 Q6ZS92 163 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ZADH2Q8N4Q0 377 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PDPRQ8NCN5 879 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 OR5T3Q8NGG3 340 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TM9SF4Q92544 642 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ESAMQ96AP7 390 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 APOPT1Q96IL0 206 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TMBIM4Q9HC24 238 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TMEM216Q9P0N5 145 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 HECTD1Q9ULT8 2610 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 UBXN8O00124 270 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 DNAJB6O75190 326 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CELA2AP08217 269 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PRR35P0CG20 571 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 C8orf89P0DMQ9 161 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ALOX12P18054 663 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 GNAZP19086 355 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 RGS1Q08116 209 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CDC16Q13042 620 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 MINDY4Q4G0A6 757 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 DEFB134Q4QY38 66 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TNFAIP8L3Q5GJ75 292 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SULT1C3Q6IMI6 304 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 LANCL3Q6ZV70 420 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 UTP15Q8TED0 518 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CREB3L4Q8TEY5 395 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PSMF1Q92530 271 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SLC6A16Q9GZN6 736 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AICDAQ9GZX7 198 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ZNF700Q9H0M5 742 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 RIC8BQ9NVN3 520 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 MKS1Q9NXB0 559 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 WWOXQ9NZC7 414 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CPSF2Q9P2I0 782 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TMCO1Q9UM00 188 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ACTL7BQ9Y614 415 aa16.86■□□□□ 0.29
TNFRSF1A-209ENST00000536717 PRAMEF4O60810 478 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms