RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MS4A6EQ96DS6 147 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 WDR77Q9BQA1 342 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-206ENST00000536429 EFCAB11Q9BUY7 163 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 ZNF700Q9H0M5 742 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 RHBGQ9H310 441 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 NT5DC2Q9H857 520 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 ANKZF1Q9H8Y5 726 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
PRKDC-206ENST00000536429 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 FOXO6A8MYZ6 492 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 ERI3O43414 337 aaKnown RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 B4GALT2O60909 372 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 SH3BGRLO75368 114 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 CLEC3AO75596 197 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 SEC24DO94855 1032 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 SORBS2O94875 1100 aaKnown RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 SHBGP04278 402 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 FHP07954 510 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PRR35P0CG20 571 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 CNTFP26441 200 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 CASP2P42575 452 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PLA2G16P53816 162 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 ALDH18A1P54886 795 aaKnown RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 BTG2P78543 158 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 RUNX2Q13950 521 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PCBP2Q15366 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 ADPRMQ3LIE5 342 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PRR30Q53SZ7 412 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 SLC6A19Q695T7 634 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 JMJD6Q6NYC1 403 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 UBE3DQ7Z6J8 389 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 ANKRD37Q7Z713 158 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 CA13Q8N1Q1 262 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 TMEM151AQ8N4L1 468 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PTGR2Q8N8N7 351 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 TTLQ8NG68 377 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 BRIX1Q8TDN6 353 aaKnown RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PSMF1Q92530 271 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PHF21BQ96EK2 531 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 IMMP1LQ96LU5 166 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 QRFPRQ96P65 431 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 F2RL3Q96RI0 385 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 LHPPQ9H008 270 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 G3BP2Q9UN86 482 aaKnown RBP12.4□□□□□ -0.42
PRKDC-206ENST00000536429 PLAAQ9Y263 795 aa12.4□□□□□ -0.42
PRKDC-206ENST00000536429 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 URADA6NGE7 173 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 ANKDD1BA6NHY2 528 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 E2F3O00716 465 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 DPM1O60762 260 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 ITGAMP11215 1152 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 PCNAP12004 261 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 EPB42P16452 691 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 EEF1DP29692 281 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 STXBP1P61764 594 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 PCDH1Q08174 1060 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 GTF2H2Q13888 395 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 ABRAXAS2Q15018 415 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 PAGE2BQ5JRK9 111 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 GTF2H2CQ6P1K8 395 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 ABHD17CQ6PCB6 329 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 TIFABQ6ZNK6 161 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 LINC00696Q6ZRV3 163 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 RPS27LQ71UM5 84 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 GOLGA7Q7Z5G4 137 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 CPEB2Q7Z5Q1 589 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 KBTBD2Q8IY47 623 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 SIRT6Q8N6T7 355 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 ZNF473Q8WTR7 871 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 MZB1Q8WU39 189 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 METTL21AQ8WXB1 218 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 OR1F2PQ96R84 312 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 PITHD1Q9GZP4 211 aaPredicted RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 REXO4Q9GZR2 422 aaKnown RBP12.39□□□□□ -0.43
PRKDC-206ENST00000536429 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
PRKDC-206ENST00000536429 CNTRLQ7Z7A1 2325 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 SAP18O00422 153 aaKnown RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 RTCAO00442 366 aaKnown RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 WISP1O95388 367 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 ALPPP05187 535 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 SERPINA7P05543 415 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 RBP1P09455 135 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 COL6A2P12110 1019 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 MAOAP21397 527 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 CERS1P27544 350 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 GSTM2P28161 218 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 TNFRSF8P28908 595 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 HNRNPFP52597 415 aaKnown RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 VSNL1P62760 191 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 FOXK1P85037 733 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 LAPTM5Q13571 262 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 NSDHLQ15738 373 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 TSNAXIP1Q2TAA8 658 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 PLEKHN1Q494U1 663 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms