RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ENO4A6NNW6 628 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 CDC7O00311 574 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 FCHO1O14526 889 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 B4GALT2O60909 372 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 CD96P40200 585 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 CA7P43166 264 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 RAB8AP61006 207 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 OLR1P78380 273 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 ALDH6A1Q02252 535 aaKnown RBP12.32□□□□□ -0.44
RTN3-207ENST00000536011 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 ART3Q13508 389 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 ZXDCQ2QGD7 858 aaPredicted RBP12.32□□□□□ -0.44
RTN3-207ENST00000536011 TICAM1Q8IUC6 712 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 ZBED8Q8IZ13 594 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 CYP4X1Q8N118 509 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 KRT78Q8N1N4 520 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 TCAIMQ8N3R3 496 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 ADAMTS18Q8TE60 1221 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 THAP3Q8WTV1 239 aaPredicted RBP12.32□□□□□ -0.44
RTN3-207ENST00000536011 TMEM125Q96AQ2 219 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 PWWP2AQ96N64 755 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 WDR83Q9BRX9 315 aaKnown RBP12.32□□□□□ -0.44
RTN3-207ENST00000536011 TRIM31Q9BZY9 425 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 PITHD1Q9GZP4 211 aaPredicted RBP12.32□□□□□ -0.44
RTN3-207ENST00000536011 KCNF1Q9H3M0 494 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 MOCS1Q9NZB8 636 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 KLF2Q9Y5W3 355 aaPredicted RBP12.32□□□□□ -0.44
RTN3-207ENST00000536011 PSAT1Q9Y617 370 aa12.32□□□□□ -0.44
RTN3-207ENST00000536011 SAGE2PA6NJ88 616 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 E7ESA3 106 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 FAM227AF5H4B4 570 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 CCL21O00585 134 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 SLC19A2O60779 497 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 WDR47O94967 919 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 MST1P26927 711 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 HNF4AP41235 474 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 PGGT1BP53609 377 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 TAS2R39P59534 338 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 PMP22Q01453 160 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 POU4F1Q01851 419 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 RCN2Q14257 317 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 TERF2Q15554 542 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 TSNQ15631 228 aaKnown RBP12.31□□□□□ -0.44
RTN3-207ENST00000536011 TOR1AIP1Q5JTV8 583 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 RPS19BP1Q86WX3 136 aaKnown RBP12.31□□□□□ -0.44
RTN3-207ENST00000536011 KLHDC8AQ8IYD2 350 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 ZNF808Q8N4W9 903 aaPredicted RBP12.31□□□□□ -0.44
RTN3-207ENST00000536011 ANKRD53Q8N9V6 530 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 ELP5Q8TE02 316 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 GAL3ST3Q96A11 431 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 SCMH1Q96GD3 660 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 SIGLEC12Q96PQ1 595 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 NPLQ9BXD5 320 aaPredicted RBP12.31□□□□□ -0.44
RTN3-207ENST00000536011 DERL2Q9GZP9 239 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 KLHL1Q9NR64 748 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 ANKRD10Q9NXR5 420 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 GPRC5BQ9NZH0 403 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 LRFN1Q9P244 771 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 MRPS33Q9Y291 106 aaKnown RBP12.31□□□□□ -0.44
RTN3-207ENST00000536011 MMACHCQ9Y4U1 282 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 CROCCQ5TZA2 2017 aa12.31□□□□□ -0.44
RTN3-207ENST00000536011 TCRBV16S1A1N1A0A5B0 115 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 ASPDHA6ND91 283 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
RTN3-207ENST00000536011 SLC25A12O75746 678 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 SP1P08047 785 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 C1GALT1C1LP0DN25 315 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 RPL21P46778 160 aaKnown RBP12.3□□□□□ -0.44
RTN3-207ENST00000536011 CYB561P49447 251 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 SMSP52788 366 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 TGM3Q08188 693 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 CBLBQ13191 982 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 ZNF460Q14592 562 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 FASTKD3Q14CZ7 662 aaKnown RBP12.3□□□□□ -0.44
RTN3-207ENST00000536011 CDKL4Q5MAI5 379 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 MAATS1Q7Z4T9 603 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 EID3Q8N140 333 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 RHBDF1Q96CC6 855 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 CCDC120Q96HB5 630 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 GPR137Q96N19 417 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 KRT12Q99456 494 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 DEFB126Q9BYW3 111 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 SPNS1Q9H2V7 528 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 RHBGQ9H310 441 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 EHD1Q9H4M9 534 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 CDCP1Q9H5V8 836 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 CHST11Q9NPF2 352 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 WWOXQ9NZC7 414 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 IKZF3Q9UKT9 509 aa12.3□□□□□ -0.44
RTN3-207ENST00000536011 CACNA1DQ01668 2161 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 IGKV3D-11A0A0A0MRZ8 115 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 ARHGAP10A1A4S6 786 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms