RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 KCNJ16Q9NPI9 418 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TIMMDC1Q9NPL8 285 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PRDM9Q9NQV7 894 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 DYRK1BQ9Y463 629 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 DCHS2Q6V1P9 2916 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TACC2O95359 2948 aa12.14□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZCWPW2A0A1B0GU75 182 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 A8MUA0 341 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PEX1O43933 1283 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MAOAP21397 527 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HNF4AP41235 474 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MAGEA6P43360 314 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ART1P52961 327 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 AP1S2P56377 157 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PLGLB1Q02325 96 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HYAL2Q12891 473 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MYBPHQ13203 477 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TESK1Q15569 626 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PHKG1Q16816 387 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 KCTD19Q17RG1 926 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 AFAP1L2Q8N4X5 818 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MCUQ8NE86 351 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SLC5A11Q8WWX8 675 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PYCR2Q96C36 320 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SNF8Q96H20 258 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 FAR2Q96K12 515 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TRIM45Q9H8W5 580 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CLK4Q9HAZ1 481 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZFP69BQ9UJL9 534 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NKX2-6A6NCS4 301 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ADAM10O14672 748 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 DIAPH2O60879 1101 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ITGA10O75578 1167 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MYO1DO94832 1006 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZWINTO95229 277 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NADKO95544 446 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GUCA1CO95843 209 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TUBB4AP04350 444 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NPPBP16860 134 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CXCR5P32302 372 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 AHRP35869 848 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SSR4P51571 173 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 IL2P60568 153 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GPR85P60893 370 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RAB8AP61006 207 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RBBP5Q15291 538 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HECTD2Q5U5R9 776 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ACAD11Q709F0 780 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 FGD2Q7Z6J4 655 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 STRA8Q7Z7C7 330 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TMPRSS11BQ86T26 416 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SPNS2Q8IVW8 549 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TRPV3Q8NET8 790 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 B3GNT7Q8NFL0 401 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ABHD11Q8NFV4 315 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 OR5M3Q8NGP4 307 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 AIF1LQ9BQI0 150 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SARGQ9BW04 601 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PRM3Q9NNZ6 103 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RNF6Q9Y252 685 aa12.12□□□□□ -0.47
TNFRSF1A-207ENST00000535958 A0A088AWK7 358 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 A8MVJ9 347 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PDE9AO76083 593 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 B3GALT4O96024 378 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ENO2P09104 434 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CCDC175P0C221 793 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PGAM1P18669 254 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZNF10P21506 573 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SAT1P21673 171 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CDC25BP30305 580 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SCTRP47872 440 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 BTG2P78543 158 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TERF2Q15554 542 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CATSPEREQ5SY80 951 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PAQR3Q6TCH7 311 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CHERPQ8IWX8 916 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 C2CD4AQ8NCU7 369 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 OR10Q1Q8NGQ4 319 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 UTP15Q8TED0 518 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 VMP1Q96GC9 406 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TSNARE1Q96NA8 513 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PPANQ9NQ55 473 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PNO1Q9NRX1 252 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HPF1Q9NWY4 346 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms