RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	NUP107	P57740	925 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SNRPN	P63162	240 aa	Known RBP	13.45	□□□□□ -0.26
POLE-208	ENST00000535934	GRM7	Q14831	915 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	NKG7	Q16617	165 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	DCAF10	Q5QP82	559 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	DHRS4L2	Q6PKH6	230 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SHISA6	Q6ZSJ9	500 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SATL1	Q86VE3	508 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	RAB43	Q86YS6	212 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.45	□□□□□ -0.26
POLE-208	ENST00000535934	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.45	□□□□□ -0.26
POLE-208	ENST00000535934		Q8NA96	180 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	ZNF480	Q8WV37	535 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SMPDL3A	Q92484	453 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	APOPT1	Q96IL0	206 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SPSB2	Q99619	263 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SLX1A	Q9BQ83	275 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	MFRP	Q9BY79	579 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	KCNK13	Q9HB14	408 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	LUZP4	Q9P127	313 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	KLHL42	Q9P2K6	505 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SLC17A6	Q9P2U8	582 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	CTSF	Q9UBX1	484 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SLC7A8	Q9UHI5	535 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	MAU2	Q9Y6X3	613 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	HIVEP3	Q5T1R4	2406 aa		13.45	□□□□□ -0.26
POLE-208	ENST00000535934	SHANK1	Q9Y566	2161 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	ESPL1	Q14674	2120 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	DOCK10	Q96BY6	2186 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934		E7ENX8	843 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	SRPX2	O60687	465 aa	Predicted RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	ALOX12B	O75342	701 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	EIF2S1	P05198	315 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	SERPINA6	P08185	405 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	MYL2	P10916	166 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	ETS2	P15036	469 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	PGGT1B	P53609	377 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	PNLIPRP1	P54315	467 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	ARL4C	P56559	192 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	TAP2	Q03519	686 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	TCTE1	Q5JU00	501 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	NEK10	Q6ZWH5	1172 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	RNF44	Q7L0R7	432 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	ARPIN	Q7Z6K5	226 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	KCNMB4	Q86W47	210 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	CPNE9	Q8IYJ1	553 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	RBM15B	Q8NDT2	890 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	TCP10L	Q8TDR4	215 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	SMAD5	Q99717	465 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	EBNA1BP2	Q99848	306 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	WDR83	Q9BRX9	315 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	AARSD1	Q9BTE6	412 aa	Known RBP	13.44	□□□□□ -0.26
POLE-208	ENST00000535934	THTPA	Q9BU02	230 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	ACSS3	Q9H6R3	686 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	GPR83	Q9NYM4	423 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	TAC3	Q9UHF0	121 aa		13.44	□□□□□ -0.26
POLE-208	ENST00000535934	SH3PXD2B	A1X283	911 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	HYKK	A2RU49	373 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	TTLL8	A6PVC2	850 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934		H0YGG7	62 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	TRMU	O75648	421 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PDE5A	O76074	875 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	SORBS2	O94875	1100 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	CAT	P04040	527 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PGAM1	P18669	254 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	RRAD	P55042	308 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ARF3	P61204	181 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PRDX1	Q06830	199 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	TSTA3	Q13630	321 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ARHGAP19	Q14CB8	494 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PRTG	Q2VWP7	1150 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PRR30	Q53SZ7	412 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	RBM20	Q5T481	1227 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	LGSN	Q5TDP6	509 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ZNF425	Q6IV72	752 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PATL1	Q86TB9	770 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	PAQR7	Q86WK9	346 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	RAB42	Q8N4Z0	105 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ABTB1	Q969K4	478 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	C10orf90	Q96M02	699 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	SLC26A1	Q9H2B4	701 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	MRPS30	Q9NP92	439 aa	Known RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	FAF1	Q9UNN5	650 aa	Predicted RBP	13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ZNF451	Q9Y4E5	1061 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	IKBKG	Q9Y6K9	419 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	CENPE	Q02224	2701 aa		13.43	□□□□□ -0.26
POLE-208	ENST00000535934	ICE1	Q9Y2F5	2266 aa		13.42	□□□□□ -0.26
POLE-208	ENST00000535934	NOTCH2	Q04721	2471 aa		13.42	□□□□□ -0.26
POLE-208	ENST00000535934	CLEC18A	A5D8T8	446 aa		13.42	□□□□□ -0.26
POLE-208	ENST00000535934	VSTM2B	A6NLU5	285 aa		13.42	□□□□□ -0.26
POLE-208	ENST00000535934	SOCS6	O14544	535 aa		13.42	□□□□□ -0.26
POLE-208	ENST00000535934	AHSG	P02765	367 aa		13.42	□□□□□ -0.26
POLE-208	ENST00000535934	ALB	P02768	609 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms