RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MMP13P45452 471 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 EFNA3P52797 238 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NR1H2P55055 460 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 SCAND1P57086 179 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NUP107P57740 925 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CLRN1P58418 232 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NOMO3P69849 1222 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PPP2R2BQ00005 443 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF33BQ06732 778 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KLC1Q07866 573 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 FOXF2Q12947 444 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PIN1Q13526 163 aaPredicted RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KEAP1Q14145 624 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 FASTKQ14296 549 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KRT33BQ14525 404 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 RFTN1Q14699 578 aaPredicted RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PTPRCAPQ14761 206 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KRTAP24-1Q3LI83 254 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TUBB8Q3ZCM7 444 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ATP13A5Q4VNC0 1218 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KRTCAP3Q53RY4 240 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ANKRD20A8PQ5CZ79 823 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PPP6R3Q5H9R7 873 aaPredicted RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF569Q5MCW4 686 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 Q5PR19 223 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 FNBP1LQ5T0N5 605 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF658Q5TYW1 1059 aaPredicted RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MARC1Q5VT66 337 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 METRNLQ641Q3 311 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ATG9BQ674R7 924 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CYB5D1Q6P9G0 228 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHL35Q6PF15 583 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ARSKQ6UWY0 536 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 GBP6Q6ZN66 633 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 RFX8Q6ZV50 586 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NEK10Q6ZWH5 1172 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NDUFAF7Q7L592 441 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ARCQ7LC44 396 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 AMZ2Q86W34 360 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TRAPPC5Q8IUR0 188 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CFAP206Q8IYR0 622 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ADGRF3Q8IZF5 1079 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 BEST3Q8N1M1 668 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TMEM132CQ8N3T6 1108 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 DNAJC22Q8N4W6 341 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 C2orf73Q8N5S3 287 aaPredicted RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 OR56A1Q8NGH5 318 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 OR5M9Q8NGP3 310 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 OR10Q1Q8NGQ4 319 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 LINC01560Q8TB33 94 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 GDAP1Q8TB36 358 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ARRDC2Q8TBH0 407 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ACTRT2Q8TDY3 377 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 SNX33Q8WV41 574 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ZFPM2Q8WW38 1151 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 LCN9Q8WX39 176 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NELFBQ8WX92 580 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KIAA1191Q96A73 305 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 RAX2Q96IS3 184 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 RMDN2Q96LZ7 410 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 C12orf66Q96MD2 445 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CD180Q99467 661 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NPAS2Q99743 824 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MGME1Q9BQP7 344 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TIMM29Q9BSF4 260 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NUP85Q9BW27 656 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 NAA15Q9BXJ9 866 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 AP1M1Q9BXS5 423 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TRIM7Q9C029 511 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KLK15Q9H2R5 256 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 SRMSQ9H3Y6 488 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PLEKHF2Q9H8W4 249 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 FANCEQ9HB96 536 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TCF7L1Q9HCS4 588 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 DMRT3Q9NQL9 472 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 C14orf119Q9NWQ9 140 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ASB6Q9NWX5 421 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 IRAK4Q9NWZ3 460 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 COQ3Q9NZJ6 369 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 SLC17A6Q9P2U8 582 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CIDEBQ9UHD4 219 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PRSS50Q9UI38 385 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF180Q9UJW8 692 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MTO1Q9Y2Z2 717 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MRPS2Q9Y399 296 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TTLL3Q9Y4R7 772 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CACNA1CQ13936 2221 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 UQCRHLA0A096LP55 91 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NSG1A0A0A6YYJ2 146 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM237AA0A1B0GTK4 181 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 A0A1W2PQ67 120 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TCRBV5S1A1TA0A578 114 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 LRRC3CA6NJW4 275 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 VSTM2BA6NLU5 285 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SIGLEC16A6NMB1 481 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 A6NNC1 897 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FOXO6A8MYZ6 492 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ANKRD66B4E2M5 251 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms