RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PCTPQ9UKL6 214 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 MKL2Q9ULH7 1088 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 TSC22D4Q9Y3Q8 395 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 ANGPTL3Q9Y5C1 460 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 B8ZZF3 427 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 MASP2O00187 686 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 GSTA1P08263 222 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 RPS17P08708 135 aaKnown RBP19.31■□□□□ 0.68
CCS-208ENST00000533244 PYGBP11216 843 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 ACPPP15309 386 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 MED27Q6P2C8 311 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 CYP4X1Q8N118 509 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 OR2L5Q8NG80 312 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 OR7G3Q8NG95 312 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 EPS8L3Q8TE67 593 aaKnown RBP19.31■□□□□ 0.68
CCS-208ENST00000533244 ZNF473Q8WTR7 871 aaKnown RBP19.31■□□□□ 0.68
CCS-208ENST00000533244 VPS50Q96JG6 964 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 NUDT9Q9BW91 350 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 IPPKQ9H8X2 491 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 ATP13A2Q9NQ11 1180 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 ZNF71Q9NQZ8 489 aaPredicted RBP19.31■□□□□ 0.68
CCS-208ENST00000533244 LANCL2Q9NS86 450 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 PCDHGB7Q9Y5F8 929 aa19.31■□□□□ 0.68
CCS-208ENST00000533244 A0A1W2PPM1 405 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 A8MT66 165 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 GOLGA8RI6L899 631 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 CHST10O43529 356 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 CDH16O75309 829 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 ALOX12BO75342 701 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 COX6A1P12074 109 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 NR1D1P20393 614 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 SERPINB1P30740 379 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 HPDP32754 393 aaPredicted RBP19.3■□□□□ 0.68
CCS-208ENST00000533244 SLCO1A2P46721 670 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 AIMP2Q13155 320 aaKnown RBP19.3■□□□□ 0.68
CCS-208ENST00000533244 GALNT16Q8N428 558 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 L3MBTL4Q8NA19 623 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 CCT6BQ92526 530 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 C8orf44Q96CB5 159 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 PEX11GQ96HA9 241 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 QRFPRQ96P65 431 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 MS4A8Q9BY19 250 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 REXO4Q9GZR2 422 aaKnown RBP19.3■□□□□ 0.68
CCS-208ENST00000533244 ZBTB26Q9HCK0 441 aa19.3■□□□□ 0.68
CCS-208ENST00000533244 H0YIV9 168 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 OR7A17O14581 309 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 ERI3O43414 337 aaKnown RBP19.29■□□□□ 0.68
CCS-208ENST00000533244 HPP00738 406 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 OLR1P78380 273 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 MYBPC3Q14896 1274 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 ABHD17CQ6PCB6 329 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 TBC1D20Q96BZ9 403 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 SMAD5Q99717 465 aaKnown RBP19.29■□□□□ 0.68
CCS-208ENST00000533244 NTMT1Q9BV86 223 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 PARD6BQ9BYG5 372 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 ACTR8Q9H981 624 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 GPR83Q9NYM4 423 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 RAB21Q9UL25 225 aa19.29■□□□□ 0.68
CCS-208ENST00000533244 IGHV1-45A0A0A0MS14 117 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 A6NL46 340 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 FOXO6A8MYZ6 492 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 FHP07954 510 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 C8orf89P0DMQ9 161 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 PGDP52209 483 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 BTN3A2P78410 334 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 RHAGQ02094 409 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 MINDY4Q4G0A6 757 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 ASB18Q6ZVZ8 466 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 CA13Q8N1Q1 262 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 MREGQ8N565 214 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 PLPP5Q8NEB5 264 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 OR52B6Q8NGF0 335 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 ZNF483Q8TF39 744 aaPredicted RBP19.28■□□□□ 0.68
CCS-208ENST00000533244 NSUN5Q96P11 429 aaKnown RBP19.28■□□□□ 0.68
CCS-208ENST00000533244 NPLQ9BXD5 320 aaPredicted RBP19.28■□□□□ 0.68
CCS-208ENST00000533244 NOL11Q9H8H0 719 aaKnown RBP19.28■□□□□ 0.68
CCS-208ENST00000533244 DCDC2Q9UHG0 476 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 ADGRE2Q9UHX3 823 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 PCDHGA11Q9Y5H2 935 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 TNRC6AQ8NDV7 1962 aaKnown RBP19.28■□□□□ 0.68
CCS-208ENST00000533244 DOCK10Q96BY6 2186 aa19.28■□□□□ 0.68
CCS-208ENST00000533244 PIK3CBP42338 1070 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 Q0VFX4 171 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 TRAF3Q13114 568 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 PCOLCEQ15113 449 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 FAAH2Q6GMR7 532 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 TRIM40Q6P9F5 258 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 NDUFAF7Q7L592 441 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 UBE3DQ7Z6J8 389 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 OR2W6PQ8NHA6 318 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 F2RL3Q96RI0 385 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 RBCK1Q9BYM8 510 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 ZNF700Q9H0M5 742 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 ZNF552Q9H707 407 aaPredicted RBP19.27■□□□□ 0.68
CCS-208ENST00000533244 EMCNQ9ULC0 261 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 G3BP2Q9UN86 482 aaKnown RBP19.27■□□□□ 0.68
CCS-208ENST00000533244 RNF11Q9Y3C5 154 aa19.27■□□□□ 0.68
CCS-208ENST00000533244 A0A088AWK7 358 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 A0A0G2JN53 185 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 OR2W5A6NFC9 320 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms