RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TRIM8Q9BZR9 551 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 KLHL31Q9H511 634 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 CHMP2BQ9UQN3 213 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 MEMO1Q9Y316 297 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 SAGE2PA6NJ88 616 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 A8MUA0 341 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 ASNA1O43681 348 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 SLC25A12O75746 678 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 MLYCDO95822 493 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 SKP1P63208 163 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 PPP1R3AQ16821 1122 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 FAM45BPQ6NSW5 357 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 QSOX2Q6ZRP7 698 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 ABHD13Q7L211 337 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 CHERPQ8IWX8 916 aaKnown RBP16■□□□□ 0.15
RPUSD4-207ENST00000532800 TBC1D19Q8N5T2 526 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 CPSF7Q8N684 471 aaKnown RBP16■□□□□ 0.15
RPUSD4-207ENST00000532800 HORMAD2Q8N7B1 307 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 FAM98AQ8NCA5 519 aaKnown RBP16■□□□□ 0.15
RPUSD4-207ENST00000532800 FAM45AQ8TCE6 357 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 ATL1Q8WXF7 558 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 PHF12Q96QT6 1004 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 NAT9Q9BTE0 207 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 SLC6A16Q9GZN6 736 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 AICDAQ9GZX7 198 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 RHBGQ9H310 441 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 NECTIN3Q9NQS3 549 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 VWA7Q9Y334 891 aa16■□□□□ 0.15
RPUSD4-207ENST00000532800 CELSR1Q9NYQ6 3014 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 IGKV3D-11A0A0A0MRZ8 115 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 NME2P1O60361 137 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 PRMT3O60678 531 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 ENO2P09104 434 aaPredicted RBP15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 SMIM10L1P0DMW3 83 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 NME2P22392 152 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 IVDP26440 423 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 AHRP35869 848 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 ELK3P41970 407 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 SMSP52788 366 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 ITGA8P53708 1063 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 MLF1P58340 268 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 ZNF460Q14592 562 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 C3P1Q6ZMU1 363 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 FGD2Q7Z6J4 655 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 THOC6Q86W42 341 aaKnown RBP15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 NFAM1Q8NET5 270 aaPredicted RBP15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 SMIM10Q96HG1 83 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 LURAP1Q96LR2 239 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 PELI2Q9HAT8 420 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 SNX12Q9UMY4 172 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 SLC22A14Q9Y267 594 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 DYRK1BQ9Y463 629 aa15.99■□□□□ 0.15
RPUSD4-207ENST00000532800 TCRBV16S1A1N1A0A5B0 115 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 NPEPPSL1A6NEC2 478 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 CDC7O00311 574 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 ABOP16442 354 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 ZNF24P17028 368 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 ZNF37AP17032 561 aaPredicted RBP15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 AGAP20933 346 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 RBBP5Q15291 538 aaKnown RBP15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 TOR1AIP1Q5JTV8 583 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 NIPAL1Q6NVV3 410 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 NXPE4Q6UWF7 544 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 ZNF295-AS1Q8N0V1 137 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 CA13Q8N1Q1 262 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 GHDCQ8N2G8 530 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 CREB3L4Q8TEY5 395 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 AGAP11Q8TF27 550 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 MTFMTQ96DP5 389 aaKnown RBP15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 AIF1LQ9BQI0 150 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 PRDM9Q9NQV7 894 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 ZFATQ9P243 1243 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 CORO1CQ9ULV4 474 aaPredicted RBP15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 PSAT1Q9Y617 370 aa15.98■□□□□ 0.15
RPUSD4-207ENST00000532800 PSMD12O00232 456 aaPredicted RBP15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 CLDN14O95500 239 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 RNH1P13489 461 aaKnown RBP15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 SAT1P21673 171 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 PTGER1P34995 402 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 RFC3P40938 356 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 KIR3DL1P43629 444 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 CYB561P49447 251 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 C18orf21Q32NC0 220 aaPredicted RBP15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 STEAP4Q687X5 459 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 DOLPP1Q86YN1 238 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 TRPV3Q8NET8 790 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 SLCO2A1Q92959 643 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 PDLIM5Q96HC4 596 aaKnown RBP15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 TRIM45Q9H8W5 580 aaPredicted RBP15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 ASB1Q9Y576 335 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 TEX264Q9Y6I9 313 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 POLQO75417 2590 aa15.97■□□□□ 0.15
RPUSD4-207ENST00000532800 A0A0G2JN53 185 aa15.96■□□□□ 0.15
RPUSD4-207ENST00000532800 TRBV11-1A0A0K0K1C0 115 aa15.96■□□□□ 0.15
RPUSD4-207ENST00000532800 URADA6NGE7 173 aa15.96■□□□□ 0.15
RPUSD4-207ENST00000532800 CES2O00748 559 aa15.96■□□□□ 0.15
RPUSD4-207ENST00000532800 ADAM10O14672 748 aa15.96■□□□□ 0.15
RPUSD4-207ENST00000532800 TRHRP34981 398 aaPredicted RBP15.96■□□□□ 0.15
RPUSD4-207ENST00000532800 HLCSP50747 726 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms