RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CEBPBP17676 345 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ABHD18Q0P651 414 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ADGRE1Q14246 886 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF852Q6ZMS4 543 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 DNAJA3Q96EY1 480 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 MTG2Q9H4K7 406 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 B4GALT7Q9UBV7 327 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 GPR34Q9UPC5 381 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 CSTBP04080 98 aaKnown RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ACRV1P26436 265 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF763Q0D2J5 394 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 PHF12Q96QT6 1004 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 PRTFDC1Q9NRG1 225 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 TAS2R9Q9NYW1 312 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 STOML2Q9UJZ1 356 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 WDR45Q9Y484 360 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 PIAS3Q9Y6X2 628 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 FEZF1A0PJY2 475 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 FAM172BPA6NC97 362 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 SOX30O94993 753 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 FARS2O95363 451 aaKnown RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 SYNGR4O95473 234 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC18A1P54219 525 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 FCHO2Q0JRZ9 810 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 DAG1Q14118 895 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 THRSPQ92748 146 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 MMABQ96EY8 250 aaPredicted RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ZBED3Q96IU2 234 aaPredicted RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 CADM1Q9BY67 442 aaKnown RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF217O75362 1048 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 PRSS56P0CW18 603 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 CTSAP10619 480 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 EN2P19622 333 aaPredicted RBP14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 TGFBIQ15582 683 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 EMC10Q5UCC4 262 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 CMKLR1Q99788 373 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 C17orf62Q9BQA9 187 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 FAM170BA6NMN3 283 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 PFKLP17858 780 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 ECHS1P30084 290 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 KIAA1161Q6NSJ0 714 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 C10orf82Q8WW14 230 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 ADAD1Q96M93 576 aaKnown RBP14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 CD180Q99467 661 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 CDCA3Q99618 268 aaPredicted RBP14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 DENND2DQ9H6A0 471 aaPredicted RBP14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 TPT1P8Q9HAU6 139 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 GLS2Q9UI32 602 aa14.27□□□□□ -0.12
PCDHA9-202ENST00000532602 A0A1W2PRG6 482 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF670-ZNF695F2Z2N8 137 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 PROZP22891 400 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 GADD45AP24522 165 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF267Q14586 743 aaPredicted RBP14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ABCA11PQ4W5N1 156 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF572Q7Z3I7 529 aaPredicted RBP14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF761Q86XN6 746 aaPredicted RBP14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 NRROSQ86YC3 692 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 OR4C15Q8NGM1 316 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 MAPKAP1Q9BPZ7 522 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 RMI1Q9H9A7 625 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 TNFRSF10DQ9UBN6 386 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 A0A1W2PRQ8 180 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 TLR4O00206 839 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ULK3Q6PHR2 472 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 STX12Q86Y82 276 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 ASB9Q96DX5 294 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 IL17FQ96PD4 163 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 GAL3ST1Q99999 423 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 M0QX08 132 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 SYPP08247 313 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 CBLP22681 906 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 PAX7P23759 505 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 NTSR1P30989 418 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 EMX2Q04743 252 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 PLP2Q04941 152 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 OR2T5Q6IEZ7 315 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 CRTC1Q6UUV9 634 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 TSPAN33Q86UF1 283 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 FAM86B1Q8N7N1 296 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 OR2T29Q8NH02 315 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 KCNC2Q96PR1 638 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 DEFB126Q9BYW3 111 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 DLGAP4Q9Y2H0 992 aa14.27□□□□□ -0.13
PCDHA9-202ENST00000532602 RLN2P04090 185 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 G6PDP11413 515 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 SLC6A4P31645 630 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 PXNP49023 591 aaPredicted RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MXD1Q05195 221 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 PEX2P28328 305 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 GMPRP36959 345 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 PGBD2Q6P3X8 592 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MED28Q9H204 178 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 ARL6IP5O75915 188 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 C6orf47O95873 294 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 JUNDP17535 347 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MTTPP55157 894 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF550Q7Z398 422 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms