RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GNALP38405 381 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 FOLR3P41439 243 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 C10orf62Q5T681 223 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-221ENST00000532331 FBXO42Q6P3S6 717 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 UNC5DQ6UXZ4 953 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 USP30Q70CQ3 517 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 RANBP9Q96S59 729 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 TAS2R1Q9NYW7 299 aa10.9□□□□□ -0.66
PTPRK-221ENST00000532331 ACOT7O00154 380 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 NR2C1P13056 603 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 ETS2P15036 469 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 SLC6A4P31645 630 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 KCNC1P48547 511 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 PCBP2Q15366 365 aaKnown RBP eCLIP10.9□□□□□ -0.678e-7■■■■■ 36.2
PTPRK-221ENST00000532331 DUOXA1Q1HG43 343 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 OR4F3Q6IEY1 312 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 FIGLAQ6QHK4 219 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 OR10H4Q8NGA5 316 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 ELSPBP1Q96BH3 223 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 C11orf24Q96F05 449 aaPredicted RBP10.9□□□□□ -0.67
PTPRK-221ENST00000532331 KCNC2Q96PR1 638 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 TRIM2Q9C040 744 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 KCNK13Q9HB14 408 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 ZFR2Q9UPR6 939 aaKnown RBP10.9□□□□□ -0.67
PTPRK-221ENST00000532331 PCDHGB7Q9Y5F8 929 aa10.9□□□□□ -0.67
PTPRK-221ENST00000532331 A0A1B0GTW7 788 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 YKT6O15498 198 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CCT3P49368 545 aaKnown RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 NFE2L1Q14494 772 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 MAPK14Q16539 360 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 TIFABQ6ZNK6 161 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 P2RY8Q86VZ1 359 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 SLC22A8Q8TCC7 542 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 GRHL3Q8TE85 626 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 IL17FQ96PD4 163 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CGREF1Q99674 301 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 TAS2R9Q9NYW1 312 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 WBP11Q9Y2W2 641 aaKnown RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 FAM25EA8MYX2 175 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CYB5AP00167 134 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 RLN1P04808 185 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ACVR2AP27037 513 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CBX5P45973 191 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 IL18R1Q13478 541 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 DEFB134Q4QY38 66 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ALKAL1Q6UXT8 129 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 DPPA4Q7L190 304 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 OR5AK3PQ8NH89 298 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ADAMTS18Q8TE60 1221 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 THAP3Q8WTV1 239 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 OMA1Q96E52 524 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 DIRAS2Q96HU8 199 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 OSBPL7Q9BZF2 842 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 COQ10BQ9H8M1 238 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ZDHHC2Q9UIJ5 367 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 RNF11Q9Y3C5 154 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 RRP8O43159 456 aaKnown RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 RAB25P57735 213 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 RPA4Q13156 261 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CDKN3Q16667 212 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 RNF111Q6ZNA4 994 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ATG14Q6ZNE5 492 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 MEIOBQ8N635 442 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 GLIS1Q8NBF1 620 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 PDPRQ8NCN5 879 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CHCHD6Q9BRQ6 235 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CSNK1G1Q9HCP0 422 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 HHATLQ9HCP6 504 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 CTPS2Q9NRF8 586 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 WASF2Q9Y6W5 498 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 KIR2DS5A0A0G2JLQ3 304 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 A0A0G2JNG1 304 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 KIR2DS3K7RE56 304 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 TAF4O00268 1085 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 NOBOXO60393 691 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 EDN1P05305 212 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 AFF3P51826 1226 aaKnown RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 GANABQ14697 944 aaKnown RBP10.89□□□□□ -0.67
PTPRK-221ENST00000532331 KIR2DS5Q14953 304 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ABHD17BQ5VST6 288 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 PARM1Q6UWI2 310 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 HORMAD2Q8N7B1 307 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 OR10G2Q8NGC3 310 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ABCB9Q9NP78 766 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 ING3Q9NXR8 418 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 TJP1Q07157 1748 aa10.89□□□□□ -0.67
PTPRK-221ENST00000532331 A0A1W2PQ72 361 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 KLF11O14901 512 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 AIREO43918 545 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 DCNP07585 359 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 NIPAL4Q0D2K0 466 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 IQCHQ86VS3 1027 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 GEMIN6Q8WXD5 167 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TMEM74Q96NL1 305 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TRIB3Q96RU7 358 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms