RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ZNF624Q9P2J8 865 aaPredicted RBP2.64□□□□□ -1.99
CD44-234ENST00000531873 KCNN3Q9UGI6 736 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 SLC12A6Q9UHW9 1150 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 HOOK1Q9UJC3 728 aaKnown RBP2.64□□□□□ -1.99
CD44-234ENST00000531873 FBXL4Q9UKA2 621 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 PILRAQ9UKJ1 303 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 PRDM4Q9UKN5 801 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 CCPG1Q9ULG6 757 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 SATB2Q9UPW6 733 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 NCKAP1Q9Y2A7 1128 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 PLEKHA6Q9Y2H5 1048 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 ATP6V0A2Q9Y487 856 aa2.64□□□□□ -1.99
CD44-234ENST00000531873 SPATA31D1Q6ZQQ2 1576 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ATP6AP2A0A1C7CYW4 349 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 GLTPD2A6NH11 291 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 MSGN1A6NI15 193 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 A8MVM7 634 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 K7EPI3 171 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 P2RY10O00398 339 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ADAM12O43184 909 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 SYT7O43581 403 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 GRAP2O75791 330 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 CLPTM1O96005 669 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 MT-ATP6P00846 226 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 CRYAAP02489 173 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 PGK2P07205 417 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 FAM157CP0CG43 387 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ERVK-10P10266 1014 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 CEACAM1P13688 526 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 FERP16591 822 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 CYP3A5P20815 502 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 MAGEA11P43364 429 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 OR3A2P47893 321 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 DLX5P56178 289 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 HSD17B7P56937 341 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 CDR2Q01850 454 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 SP3Q02447 781 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 PPP1R8Q12972 351 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 ITGA9Q13797 1035 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 KARSQ15046 597 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 ZRSR1Q15695 479 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 ZNF74Q16587 644 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 STX1AQ16623 288 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 TAF1BQ53T94 588 aaPredicted RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 LCN1P1Q5VSP4 162 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ZNF776Q68DI1 518 aaPredicted RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 SLC25A47Q6Q0C1 308 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 C15orf52Q6ZUT6 534 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 BTN2A1Q7KYR7 527 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 FCRLAQ7L513 359 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 TRMT11Q7Z4G4 463 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 ZDHHC17Q8IUH5 632 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 TEX26Q8N6G2 289 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 STPG4Q8N801 248 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 RNF149Q8NC42 400 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ZBTB44Q8NCP5 570 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 SPATA18Q8TC71 538 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 CHURC1Q8WUH1 139 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 GATAD1Q8WUU5 269 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 DYRK2Q92630 601 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 GLYATL1Q969I3 302 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ESAMQ96AP7 390 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ZNF524Q96C55 264 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 BPIFA2Q96DR5 249 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 C16orf58Q96GQ5 468 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 THOC3Q96J01 351 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 GUCD1Q96NT3 240 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 TAAR6Q96RI8 345 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 LPAR4Q99677 370 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ASCL2Q99929 193 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 NACAP1Q9BZK3 213 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 EGLN1Q9GZT9 426 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 DDX47Q9H0S4 455 aaKnown RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 DCLRE1BQ9H816 532 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ZNF71Q9NQZ8 489 aaPredicted RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 SOHLH2Q9NX45 425 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 C19orf25Q9UFG5 118 aaPredicted RBP2.63□□□□□ -1.99
CD44-234ENST00000531873 NUDCQ9Y266 331 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 ETV7Q9Y603 341 aa2.63□□□□□ -1.99
CD44-234ENST00000531873 NPC1L1Q9UHC9 1359 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 A0A087WZ39 114 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 A0A0U1RRA0 63 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ARHGAP42A6NI28 874 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 CYTIPO60759 359 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 HSF2BPO75031 334 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 OR6B1O95007 311 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 CPNE6O95741 557 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GUCA1CO95843 209 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GAS8O95995 478 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 VTNP04004 478 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ATP1A1P05023 1023 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 PTMAP06454 111 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 F7P08709 466 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 ZCCHC18P0CG32 403 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 CCDC192P0DO97 292 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GHRP10912 638 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 SLC2A2P11168 524 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 ANPEPP15144 967 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 HOXB6P17509 224 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 DESP17661 470 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms