RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 MAT1AQ00266 395 aaKnown RBP17.02■□□□□ 0.32
SCN4B-205ENST00000531550 ALDH6A1Q02252 535 aaKnown RBP17.02■□□□□ 0.32
SCN4B-205ENST00000531550 TUBA3CQ13748 450 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 GARNL3Q5VVW2 1013 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 FCRLBQ6BAA4 426 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 PTRHD1Q6GMV3 140 aaKnown RBP17.02■□□□□ 0.32
SCN4B-205ENST00000531550 ZNF549Q6P9A3 640 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 TUBA3EQ6PEY2 450 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 PAQR7Q86WK9 346 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 MDS2Q8NDY4 140 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 ATP6V1G3Q96LB4 118 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 SIGLEC12Q96PQ1 595 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 PANX3Q96QZ0 392 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 HES7Q9BYE0 225 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 DRC3Q9H069 523 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 CCDC68Q9H2F9 335 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 MRPS30Q9NP92 439 aaKnown RBP17.02■□□□□ 0.32
SCN4B-205ENST00000531550 KLHL1Q9NR64 748 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 VWA7Q9Y334 891 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 ACTL7BQ9Y614 415 aa17.02■□□□□ 0.32
SCN4B-205ENST00000531550 IGHV3-20A0A0C4DH32 117 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 IGKV1-8A0A0C4DH67 115 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 ASPDHA6ND91 283 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 HMGB1P1B2RPK0 211 aaPredicted RBP17.01■□□□□ 0.31
SCN4B-205ENST00000531550 NPIPA5E9PKD4 350 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 H3BMM5 538 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 FMO4P31512 558 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 MAGEA12P43365 314 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 CSNK1G2P78368 415 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 BMPR2Q13873 1038 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 BTBD16Q32M84 506 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 HSP90B2PQ58FF3 399 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 TTMPQ5BVD1 217 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 ACER2Q5QJU3 275 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
SCN4B-205ENST00000531550 HECTD2Q5U5R9 776 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 PLAG1Q6DJT9 500 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 MEX3BQ6ZN04 569 aaKnown RBP17.01■□□□□ 0.31
SCN4B-205ENST00000531550 MAGEC3Q8TD91 643 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 ACMSDQ8TDX5 336 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 METTL21AQ8WXB1 218 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 SCMH1Q96GD3 660 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 ZNF354BQ96LW1 612 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 FOPNLQ96NB1 174 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 FRMD6Q96NE9 622 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 TREX2Q9BQ50 279 aaPredicted RBP17.01■□□□□ 0.31
SCN4B-205ENST00000531550 VN1R1Q9GZP7 353 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 GNPTGQ9UJJ9 305 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 NPIPA1Q9UND3 350 aa17.01■□□□□ 0.31
SCN4B-205ENST00000531550 A0A1W2PPM1 405 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 KPNA5O15131 536 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 ALDOAP04075 364 aaKnown RBP17■□□□□ 0.31
SCN4B-205ENST00000531550 ERGP11308 486 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 SERPINB8P50452 374 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 TAS2R39P59534 338 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 USP10Q14694 798 aaKnown RBP17■□□□□ 0.31
SCN4B-205ENST00000531550 OR1C1Q15619 314 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 CTSL3PQ5NE16 218 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 H3F3CQ6NXT2 135 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 SUSD1Q6UWL2 747 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 LANCL3Q6ZV70 420 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 SH2D5Q6ZV89 423 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 OTOAQ7RTW8 1153 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 CCDC91Q7Z6B0 441 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 EXOC3L1Q86VI1 746 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 SIAH3Q8IW03 269 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 GPATCH11Q8N954 259 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 AGAP11Q8TF27 550 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 PHF10Q8WUB8 498 aaKnown RBP17■□□□□ 0.31
SCN4B-205ENST00000531550 TSPAN17Q96FV3 270 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 OR2A5Q96R48 311 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 ANKRD10Q9NXR5 420 aa17■□□□□ 0.31
SCN4B-205ENST00000531550 TSR3Q9UJK0 312 aaKnown RBP17■□□□□ 0.31
SCN4B-205ENST00000531550 P2RX6O15547 441 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 ZNHIT1O43257 154 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 EZRP15311 586 aaKnown RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 CD1EP15812 388 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 ABOP16442 354 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 STMN1P16949 149 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 CRABP2P29373 138 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 TYK2P29597 1187 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 EEF1DP29692 281 aaKnown RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 RPA3P35244 121 aaPredicted RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 ST13P50502 369 aaKnown RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 SLC18A2Q05940 514 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 ZKSCAN8Q15776 578 aaPredicted RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 ZNF425Q6IV72 752 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 CPEB2Q7Z5Q1 589 aaKnown RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 CRLF3Q8IUI8 442 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 KCNJ9Q92806 393 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 RERGQ96A58 199 aaPredicted RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 DMRTA2Q96SC8 542 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 NDNQ99608 321 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 UTP23Q9BRU9 249 aaKnown RBP16.99■□□□□ 0.31
SCN4B-205ENST00000531550 KCNK13Q9HB14 408 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 POPDC3Q9HBV1 291 aa16.99■□□□□ 0.31
SCN4B-205ENST00000531550 SNX15Q9NRS6 342 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms