RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RNASEH2BQ5TBB1 312 aaKnown RBP17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 QSOX2Q6ZRP7 698 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 PPIL6Q8IXY8 311 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 ANKRD53Q8N9V6 530 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 NFAM1Q8NET5 270 aaPredicted RBP17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 DMRTA2Q96SC8 542 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 OLFM1Q99784 485 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 RHBGQ9H310 441 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 NECTIN3Q9NQS3 549 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 ZFP69BQ9UJL9 534 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 IKZF3Q9UKT9 509 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 SPG11Q96JI7 2443 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 PABPN1LA6NDY0 278 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 E9PLN8 166 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 PRRG2O14669 202 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 MEOX1P50221 254 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 HLCSP50747 726 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 AP1S2P56377 157 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 RIPPLY3P57055 190 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 IL2P60568 153 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 SKP1P63208 163 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 HYAL2Q12891 473 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 PDAP1Q13442 181 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 CSHL1Q14406 222 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 ABHD13Q7L211 337 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 STRA8Q7Z7C7 330 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 IGDCC3Q8IVU1 814 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 GPATCH11Q8N954 259 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 PHF10Q8WUB8 498 aaKnown RBP17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 SLC5A11Q8WWX8 675 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 TMEM125Q96AQ2 219 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 SDCCAG3Q96C92 435 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 FBXL8Q96CD0 374 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 VKORC1Q9BQB6 163 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 TRIM45Q9H8W5 580 aaPredicted RBP17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 PPT2Q9UMR5 302 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 MTORP42345 2549 aa17.23■□□□□ 0.35
SSSCA1-206ENST00000531405 IGKV3D-11A0A0A0MRZ8 115 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 TCRBV16S1A1N1A0A5B0 115 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 TFECO14948 347 aaPredicted RBP17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 NRDCO43847 1150 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 TRHRP34981 398 aaPredicted RBP17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 CCZ1BP86790 482 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 CCZ1P86791 482 aaPredicted RBP17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 REEP5Q00765 189 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 HECTD2Q5U5R9 776 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 CNTN4Q8IWV2 1026 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 TBC1D19Q8N5T2 526 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 CA5BP1Q8WTZ4 195 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 PBKQ96KB5 322 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 TRIM54Q9BYV2 358 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 DEFB126Q9BYW3 111 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 SLC6A16Q9GZN6 736 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 AICDAQ9GZX7 198 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 PRDM9Q9NQV7 894 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 PPP2R2CQ9Y2T4 447 aa17.22■□□□□ 0.35
SSSCA1-206ENST00000531405 TRBV11-1A0A0K0K1C0 115 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 A0A1B0GTH9 108 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 PSMD12O00232 456 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 PGRMC1O00264 195 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 FCHO1O14526 889 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 CDC40O60508 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 RNH1P13489 461 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 AHRP35869 848 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 TLE4Q04727 773 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 TOR1AIP1Q5JTV8 583 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 SPANXN3Q5MJ09 141 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 HP1BP3Q5SSJ5 553 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 NIPAL1Q6NVV3 410 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 SBSNQ6UWP8 590 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 MEX3BQ6ZN04 569 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 TMPRSS11BQ86T26 416 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 CD163Q86VB7 1156 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 LRRC8AQ8IWT6 810 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 SULF2Q8IWU5 870 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 CA13Q8N1Q1 262 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 ATL1Q8WXF7 558 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 CERS2Q96G23 380 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 SPOCK3Q9BQ16 436 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 PLAC1Q9HBJ0 212 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 PPANQ9NQ55 473 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 ZFATQ9P243 1243 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 HRH3Q9Y5N1 445 aa17.21■□□□□ 0.35
SSSCA1-206ENST00000531405 CDK2AP1O14519 115 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 HS6ST1O60243 411 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 MYO1DO94832 1006 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 TTC4O95801 387 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 TPOP07202 933 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 SMIM10L1P0DMW3 83 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 PTGS2P35354 604 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 NR0B1P51843 470 aaKnown RBP17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 GPR85P60893 370 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 RBBP5Q15291 538 aaKnown RBP17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 PPP1R7Q15435 360 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 BBS9Q3SYG4 887 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 KIAA0408Q6ZU52 694 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 MDGA2Q7Z553 956 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 THOC6Q86W42 341 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms