RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PIGNO95427 931 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ELAVL4P26378 380 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CD82P27701 267 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 MMP12P39900 470 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 AIF1P55008 147 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SLC12A2P55011 1212 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 KIAA1024LP59773 190 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 RPS13P62277 151 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 KLF9Q13886 244 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 GALNT3Q14435 633 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CCNG2Q16589 344 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 BAK1Q16611 211 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 UGP2Q16851 508 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 GXYLT1Q4G148 440 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 C14orf28Q4W4Y0 310 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TCP11X2Q5H9J9 407 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 DNAJC24Q6P3W2 148 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SCYL2Q6P3W7 929 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM57BQ71RH2 274 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 B4GALNT4Q76KP1 1039 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TAF8Q7Z7C8 310 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ARMC8Q8IUR7 673 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 COL27A1Q8IZC6 1860 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 UMODL1-AS1Q8N2C9 162 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 Q8N9G6 341 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM47BQ8NA70 645 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 OR56A4Q8NGH8 313 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 JOSD2Q8TAC2 188 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 KIAA1524Q8TCG1 905 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 VOPP1Q96AW1 172 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 EME1Q96AY2 570 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 RNF125Q96EQ8 232 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PDXPQ96GD0 296 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FRMD8Q9BZ67 464 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 GANQ9H2C0 597 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ATP13A3Q9H7F0 1226 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ZNF304Q9HCX3 659 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SLC22A11Q9NSA0 550 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ADAM22Q9P0K1 906 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 LHX3Q9UBR4 397 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 OR1A2Q9Y585 309 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FLNCQ14315 2725 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FBN2P35556 2912 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PCNX1Q96RV3 2341 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 DNAJC9-AS1A6NH13 148 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ARHGAP42A6NI28 874 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SIGLEC16A6NMB1 481 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 B4DGG1 531 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 NUDT21O43809 227 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 RECQL5O94762 991 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 HOXC4P09017 264 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 UNGP13051 313 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 KRT10P13645 584 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 HOXB9P17482 250 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CHRNB2P17787 502 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 GSTM2P28161 218 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 RFC1P35251 1148 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 STAT1P42224 750 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 RAD52P43351 418 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CSNK1DP48730 415 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 NDST2P52849 883 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 DRG2P55039 364 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TPI1P60174 286 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 POLR2FP61218 127 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 POLR2LP62875 67 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ID2Q02363 134 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ZFP36L1Q07352 338 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 BCL2L1Q07817 233 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PTP4A2Q12974 167 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CYTH1Q15438 398 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TGIF1Q15583 401 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 GPR68Q15743 365 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CLPPQ16740 277 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TSTQ16762 297 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 AP5B1Q2VPB7 878 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 DPCR1Q3MIW9 517 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 LINC00303Q3SY05 128 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 MIDNQ504T8 468 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SH2D4BQ5SQS7 431 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SPECC1LQ69YQ0 1117 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 WDR59Q6PJI9 974 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 ZNF575Q86XF7 245 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PHF13Q86YI8 300 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 KLBQ86Z14 1044 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CAMK1DQ8IU85 385 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PYROXD2Q8N2H3 581 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 OR1E3Q8WZA6 343 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 B3GNT4Q9C0J1 378 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 DPEP2Q9H4A9 486 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CLSTN2Q9H4D0 955 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 WDR26Q9H7D7 661 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 PDFQ9HBH1 243 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FGF22Q9HCT0 170 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SMYD2Q9NRG4 433 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 KRT84Q9NSB2 600 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FAM207AQ9NSI2 230 aaPredicted RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 STARD5Q9NSY2 213 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 SEPT11Q9NVA2 429 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms