RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PLPP1O14494 284 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 MAP3K13O43283 966 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 OR1F1O43749 312 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 PRICKLE3O43900 615 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 KLHL18O94889 574 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 IFNA14P01570 189 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 DRD2P14416 443 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 UQCRC2P22695 453 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 MAT2AP31153 395 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 MAGEA8P43361 318 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 TSFMP43897 325 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 RPS6KA3P51812 740 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 SH3BGRP55822 239 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 ANKRD26P1Q6NSI1 321 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 IYDQ6PHW0 289 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 ENPP7Q6UWV6 458 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 KIAA1324Q6UXG2 1013 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 PIWIL3Q7Z3Z3 882 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 STK32CQ86UX6 486 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 ZDHHC21Q8IVQ6 265 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 C2orf73Q8N5S3 287 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 ANKRD53Q8N9V6 530 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 OR52E1Q8NGJ3 308 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 OR5P2Q8WZ92 322 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 TM4SF18Q96CE8 201 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 ABHD8Q96I13 439 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 CHST8Q9H2A9 424 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 TMEM38AQ9H6F2 299 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 DDX31Q9H8H2 851 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 TM9SF3Q9HD45 589 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 CUEDC1Q9NWM3 386 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 TRNAU1APQ9NX07 287 aaKnown RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 TAS2R7Q9NYW3 318 aa14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 FAF1Q9UNN5 650 aaPredicted RBP14.12□□□□□ -0.15
ECHDC1-220ENST00000528402 SAP18O00422 153 aaKnown RBP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 MAN2B1O00754 1011 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ALPLP05186 524 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 IL3P08700 152 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 SMIM18P0DKX4 95 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 THRBP10828 461 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 TPMTP51580 245 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 PPP2CBP62714 309 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 PPP2CAP67775 309 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 HBA1P69905 142 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ADARB1P78563 741 aaKnown RBP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF630Q2M218 657 aaPredicted RBP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 CYBRD1Q53TN4 286 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF385BQ569K4 471 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ZC3H12BQ5HYM0 836 aaKnown RBP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 GCNT6Q5T4J0 391 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 TTC33Q6PID6 262 aaPredicted RBP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 USP51Q70EK9 711 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 CCDC80Q76M96 950 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF551Q7Z340 670 aaPredicted RBP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 LMNTD1Q8N9Z9 388 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 TSPAN14Q8NG11 270 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 RPLP0P6Q8NHW5 317 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 FAM174AQ8TBP5 190 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 FAM3CQ92520 227 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC35A5Q9BS91 424 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 FAIM2Q9BWQ8 316 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC6A17Q9H1V8 727 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 NEUROD4Q9HD90 331 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 EHD3Q9NZN3 535 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 THEGQ9P2T0 379 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ERVK-11Q9UQG0 969 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 ORC6Q9Y5N6 252 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 HEATR5BQ9P2D3 2071 aa14.11□□□□□ -0.15
ECHDC1-220ENST00000528402 F5P12259 2224 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 A0A087WXM4 84 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 C2CD4DB7Z1M9 353 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 NDUFS4O43181 175 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 SUV39H1O43463 412 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 LATO43561 262 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 NOBOXO60393 691 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 FKBP9O95302 570 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF682O95780 498 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 C6orf47O95873 294 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 B3GALT4O96024 378 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 IGLV3-19P01714 112 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 SEMG1P04279 462 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 FABP3P05413 133 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 NDUFV2P19404 249 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 CCR5P51681 352 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 RAD23AP54725 363 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 TGM3Q08188 693 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC14A1Q13336 389 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 APOFQ13790 326 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 MLC1Q15049 377 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 ZIC1Q15915 447 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 NKG7Q16617 165 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 LRRC23Q53EV4 343 aaPredicted RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 RNF220Q5VTB9 566 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 OR4C11Q6IEV9 310 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 OR2T5Q6IEZ7 315 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 TMEM214Q6NUQ4 689 aaKnown RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 DUS1LQ6P1R4 473 aaKnown RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 SHQ1Q6PI26 577 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms