RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-204	ENST00000527064		V9GYY5	206 aa	Predicted RBP	13.61	□□□□□ -0.23
NXF1-204	ENST00000527064	KALRN	O60229	2985 aa		13.61	□□□□□ -0.23
NXF1-204	ENST00000527064	NUP210L	Q5VU65	1888 aa		13.61	□□□□□ -0.23
NXF1-204	ENST00000527064		A0A1W2PQ72	361 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064		A6NL46	340 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	SMIM23	A6NLE4	172 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064		B8ZZF3	427 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	PSMD12	O00232	456 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	GLRA3	O75311	464 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	SIX3	O95343	332 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	TUBB	P07437	444 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	FH	P07954	510 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	NUDT17	P0C025	328 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	SMIM10L1	P0DMW3	83 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	PYGB	P11216	843 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	HNRNPH1	P31943	449 aa	Known RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	ARL1	P40616	181 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	SOX8	P57073	446 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	AP2B1	P63010	937 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	IFFO1	Q0D2I5	559 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	ADPRM	Q3LIE5	342 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	TMEM35A	Q53FP2	167 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	VWA5B1	Q5TIE3	1220 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	ASB18	Q6ZVZ8	466 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	NDUFAF7	Q7L592	441 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	VN1R5	Q7Z5H4	357 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	TMEM151B	Q8IW70	566 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	RIBC1	Q8N443	379 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	FDCSP	Q8NFU4	85 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	OR2L5	Q8NG80	312 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	OR5T3	Q8NGG3	340 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	ADAMTS18	Q8TE60	1221 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	EPS8L3	Q8TE67	593 aa	Known RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	ATP6V1E2	Q96A05	226 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	TBC1D20	Q96BZ9	403 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	PEX11G	Q96HA9	241 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	SMIM10	Q96HG1	83 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	CENPK	Q9BS16	269 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	NPL	Q9BXD5	320 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	ROGDI	Q9GZN7	287 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	VN1R1	Q9GZP7	353 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	KLHL31	Q9H511	634 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	RIC8B	Q9NVN3	520 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	DCDC2	Q9UHG0	476 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	PCTP	Q9UKL6	214 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	TSC22D4	Q9Y3Q8	395 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	PCDHGA11	Q9Y5H2	935 aa		13.6	□□□□□ -0.23
NXF1-204	ENST00000527064	PCSK5	Q92824	1860 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	LOC102723996	A0A087X1L8	192 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	NSG1	A0A0A6YYJ2	146 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	LRRC14B	A6NHZ5	514 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064		A8MT66	165 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064		H0YIV9	168 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	GOLGA8R	I6L899	631 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	CHST10	O43529	356 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	B3GALT2	O43825	422 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	RPS17	P08708	135 aa	Known RBP	13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	COX6A1	P12074	109 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	RNH1	P13489	461 aa	Known RBP	13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	ITGA3	P26006	1051 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	PIK3CB	P42338	1070 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	CCNG1	P51959	295 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	OLR1	P78380	273 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	BTN3A2	P78410	334 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	RCN2	Q14257	317 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	MYBPC3	Q14896	1274 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	ERCC6L	Q2NKX8	1250 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	FAAH2	Q6GMR7	532 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	TMEM205	Q6UW68	189 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	CHSY3	Q70JA7	882 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	SLC22A9	Q8IVM8	553 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	L3MBTL4	Q8NA19	623 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	OR7G3	Q8NG95	312 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	ZNF473	Q8WTR7	871 aa	Known RBP	13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	C8orf44	Q96CB5	159 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	CMTM7	Q96FZ5	175 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	KCNC2	Q96PR1	638 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	RBCK1	Q9BYM8	510 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	NOL11	Q9H8H0	719 aa	Known RBP	13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	MLXIPL	Q9NP71	852 aa		13.59	□□□□□ -0.23
NXF1-204	ENST00000527064	BOD1L1	Q8NFC6	3051 aa		13.58	□□□□□ -0.23
NXF1-204	ENST00000527064	PIEZO2	Q9H5I5	2752 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	IGHV1-45	A0A0A0MS14	117 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	C4orf51	C9J302	202 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	JRK	O75564	520 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	CDC123	O75794	336 aa	Predicted RBP	13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	CLDN9	O95484	217 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	B3GALT4	O96024	378 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	OTC	P00480	354 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	CCT5	P48643	541 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	PLA2G16	P53816	162 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	MTTP	P55157	894 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	HERVK_113	P63132	956 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	EEF1A2	Q05639	463 aa	Known RBP	13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	KLRB1	Q12918	225 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	C10orf62	Q5T681	223 aa	Predicted RBP	13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	ADNP2	Q6IQ32	1131 aa		13.58	□□□□□ -0.24
NXF1-204	ENST00000527064	KBTBD2	Q8IY47	623 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms