RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 H2AFJQ9BTM1 129 aa15.06■□□□□ 0
PTPRU-210ENST00000527027 XAB2Q9HCS7 855 aaKnown RBP15.06■□□□□ 0
PTPRU-210ENST00000527027 TCRBV16S1A1N1A0A5B0 115 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 USP27XA6NNY8 438 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 PEX1O43933 1283 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 HS6ST1O60243 411 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 CDC40O60508 579 aaKnown RBP eCLIP15.05■□□□□ -0
PTPRU-210ENST00000527027 KRT14P02533 472 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 ZNF888P0CJ79 500 aaPredicted RBP15.05■□□□□ -0
PTPRU-210ENST00000527027 MAOAP21397 527 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 CHRNB4P30926 498 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 RFC3P40938 356 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 RGS1Q08116 209 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 PHKG1Q16816 387 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 CMPK2Q5EBM0 449 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 DUPD1Q68J44 220 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 ABHD13Q7L211 337 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 MYO1HQ8N1T3 1032 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 ZFP62Q8NB50 900 aaPredicted RBP15.05■□□□□ -0
PTPRU-210ENST00000527027 NT5CQ8TCD5 201 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 RND1Q92730 232 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 PYCR2Q96C36 320 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 SERPINB12Q96P63 405 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 TP63Q9H3D4 680 aaPredicted RBP15.05■□□□□ -0
PTPRU-210ENST00000527027 KCNJ16Q9NPI9 418 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 PRDM9Q9NQV7 894 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 NPDC1Q9NQX5 325 aaPredicted RBP15.05■□□□□ -0
PTPRU-210ENST00000527027 TAS2R13Q9NYV9 303 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 TNFRSF10DQ9UBN6 386 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 ZFP69BQ9UJL9 534 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 RNF6Q9Y252 685 aa15.05■□□□□ -0
PTPRU-210ENST00000527027 IGKV3D-11A0A0A0MRZ8 115 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 A8MUA0 341 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 GOLGA8MH3BSY2 632 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 TOXO94900 526 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 RNH1P13489 461 aaKnown RBP15.04■□□□□ -0
PTPRU-210ENST00000527027 SCTRP47872 440 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 TFF3Q07654 80 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 DHX9Q08211 1270 aaKnown RBP15.04■□□□□ -0
PTPRU-210ENST00000527027 HSP90AA5PQ58FG0 334 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 ARHGAP11AQ6P4F7 1023 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 PAQR3Q6TCH7 311 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 DMRTC2Q8IXT2 367 aaPredicted RBP15.04■□□□□ -0
PTPRU-210ENST00000527027 TMEM156Q8N614 296 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 ARMC2Q8NEN0 867 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 OR56A3Q8NH54 315 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 UTP15Q8TED0 518 aaKnown RBP15.04■□□□□ -0
PTPRU-210ENST00000527027 OR4K3Q96R72 315 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 NDNQ99608 321 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 FAM167BQ9BTA0 163 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 UCK2Q9BZX2 261 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 NECTIN3Q9NQS3 549 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 PLSCR2Q9NRY7 297 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 IARS2Q9NSE4 1012 aaKnown RBP15.04■□□□□ -0
PTPRU-210ENST00000527027 MAD1L1Q9Y6D9 718 aa15.04■□□□□ -0
PTPRU-210ENST00000527027 NKX2-6A6NCS4 301 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 URADA6NGE7 173 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 PSMD12O00232 456 aaPredicted RBP15.03■□□□□ -0
PTPRU-210ENST00000527027 AHRP35869 848 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 CLCN2P51788 898 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 ART1P52961 327 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 CSHL1Q14406 222 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 CATSPEREQ5SY80 951 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 KIAA0408Q6ZU52 694 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 MDGA2Q7Z553 956 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 CYP4Z2PQ8N1L4 340 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 AGGF1Q8N302 714 aaeCLIP15.03■□□□□ -0
PTPRU-210ENST00000527027 APCDD1LQ8NCL9 501 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 LINGO1Q96FE5 620 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 SIGLEC10Q96LC7 697 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 ARL15Q9NXU5 204 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 ZFATQ9P243 1243 aa15.03■□□□□ -0
PTPRU-210ENST00000527027 TRBV11-1A0A0K0K1C0 115 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 PABPN1LA6NDY0 278 aaKnown RBP15.02■□□□□ -0
PTPRU-210ENST00000527027 FAM90A27PA6NNH2 459 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 ITGA10O75578 1167 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 PDE9AO76083 593 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 HOXD4P09016 255 aaPredicted RBP15.02■□□□□ -0
PTPRU-210ENST00000527027 SMIM10L1P0DMW3 83 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 MSX1P28360 303 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 CXCR5P32302 372 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 HNF4AP41235 474 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 MAGEA3P43357 314 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 AP1S2P56377 157 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 GPR85P60893 370 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 RAB8AP61006 207 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 PMPCAQ10713 525 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 EMC4Q5J8M3 183 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 CES4AQ5XG92 561 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 TTC27Q6P3X3 843 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 PAOXQ6QHF9 649 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 CCDC71Q8IV32 467 aaPredicted RBP15.02■□□□□ -0
PTPRU-210ENST00000527027 SPC24Q8NBT2 197 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.02■□□□□ -0
PTPRU-210ENST00000527027 C2CD4AQ8NCU7 369 aaPredicted RBP15.02■□□□□ -0
PTPRU-210ENST00000527027 TRPV3Q8NET8 790 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 B3GNT7Q8NFL0 401 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 OR52N2Q8NGI0 321 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 SMIM10Q96HG1 83 aa15.02■□□□□ -0
PTPRU-210ENST00000527027 ZNF559Q9BR84 538 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms