RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SORCS1Q8WY21 1168 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 EZH1Q92800 747 aaPredicted RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 GORASP1Q9BQQ3 440 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 GIN1Q9NXP7 522 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 RIMKLBQ9ULI2 386 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF670-ZNF695F2Z2N8 137 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 GSTT2BP0CG30 244 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MTHFD1P11586 935 aaKnown RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC6A6P31641 620 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 OR4D2P58180 307 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 CHAF1BQ13112 559 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 CBFBQ13951 182 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM25Q86YD3 366 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MED28Q9H204 178 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 EI24O14681 340 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 ARPC2O15144 300 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MID1O15344 667 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 ITM2AO43736 263 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 H6PDO95479 791 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 S100A9P06702 114 aaKnown RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 GPX6P59796 221 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 WDR5P61964 334 aaKnown RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MXD1Q05195 221 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MERTKQ12866 999 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 METTL27Q8N6F8 245 aaPredicted RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MRGPRX2Q96LB1 330 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 MAPKAP1Q9BPZ7 522 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 ASB6Q9NWX5 421 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 GLS2Q9UI32 602 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 FAM172BPA6NC97 362 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 H3BQ06 376 aaPredicted RBP15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 HMGCLP35914 325 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 PITPNAQ00169 270 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 RIN1Q13671 783 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 GRM7Q14831 915 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 EGFLAMQ63HQ2 1017 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 USP43Q70EL4 1123 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 OR5P2Q8WZ92 322 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 DPH7Q9BTV6 452 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 LMAN1LQ9HAT1 526 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 PCDHB16Q9NRJ7 776 aa15.68■□□□□ 0.1
PCDHA3-201ENST00000522353 TEX46H3BTG2 121 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SOX1O00570 391 aaPredicted RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 OR1I1O60431 355 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 CHRM1P11229 460 aaPredicted RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 HNRNPA2B1P22626 353 aaKnown RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 RAB28P51157 221 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC18A2Q05940 514 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 MRPL49Q13405 166 aaKnown RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 ZFP69Q49AA0 526 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF678Q5SXM1 525 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 CATSPEREQ5SY80 951 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC2A7Q6PXP3 512 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 FRMD7Q6ZUT3 714 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 USP53Q70EK8 1073 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 CHCHD4Q8N4Q1 142 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 OR52B2Q96RD2 323 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 TBX5Q99593 518 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 YTHDF1Q9BYJ9 559 aaKnown RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 UCK2Q9BZX2 261 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 PCDHAC1Q9H158 963 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 NLGN3Q9NZ94 848 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 GRHPRQ9UBQ7 328 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 FKBP7Q9Y680 259 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 TCHHQ07283 1943 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 ADRB3P13945 408 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 EPCAMP16422 314 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 UFM1P61960 85 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 MEF2AQ02078 507 aaPredicted RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 FLYWCH1Q4VC44 716 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 TCTE1Q5JU00 501 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 RNF111Q6ZNA4 994 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SH3YL1Q96HL8 342 aaPredicted RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 LRCH3Q96II8 777 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SAGE1Q9NXZ1 904 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF221Q9UK13 617 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 OARD1Q9Y530 152 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 WASF2Q9Y6W5 498 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM233B4DJY2 109 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 MAFKO60675 156 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 CNMDO75829 334 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 NTHL1P78549 312 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 BLMHQ13867 455 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 DEFB134Q4QY38 66 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SDR16C5Q8N3Y7 309 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 GLIS1Q8NBF1 620 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 RHEBL1Q8TAI7 183 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 HPS1Q92902 700 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC7A8Q9UHI5 535 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 GLOD5A6NK44 160 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 BLOC1S5-TXNDC5H3BN57 136 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 CYP17A1P05093 508 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 JUPP14923 745 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 UQCRC2P22695 453 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 NUDT1P36639 197 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 PITX1P78337 314 aaPredicted RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SCRN3Q0VDG4 424 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 CLLU1OSQ5K130 101 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms